Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colobus_20angolensis_20palliatus_20[refseq_20GCF_5F000951035.1_20201 5-03-12] 13,124 sequences; 2,970,124,662 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq6460 86.0 5e-12 seq4805 82.4 6e-11 >seq6460 Length=10151297 Score = 86.0 bits (94), Expect = 5e-12 Identities = 158/232 (68%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 27016 TATTGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGT 27075 || |||| || ||| |||| |||| || | || || ||||| || || ||||||| Sbjct 3934060 TAATGCCACCTTGCAGGAGCAACACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGT 3934119 Query 27076 CGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCG 27135 | | |||| | ||||| |||||||| ||||| | || ||| |||| || || | Sbjct 3934120 CTGAGAGAGTGCGGCCATCTTCCAGCTGTTTGCCGGCAAATATCAGATGCTGCTGGTCAG 3934179 Query 27136 GCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTT 27195 | || | |||||| || | || |||| ||| | || | ||||| ||| | Sbjct 3934180 GTGGGATACCCTCCTTGTGTTGAATTTTGTCTTTGTCATTCTCAATGGTGTCACTGGGCT 3934239 Query 27196 CAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | || || || || || | ||||||||| || || ||||||||||| ||||| Sbjct 3934240 CGACCTCAAGGGTGATGGTTTTGCCCGTGAGGGTCTTCACAAAGATCTGCAT 3934291 >seq4805 Length=5228064 Score = 82.4 bits (90), Expect = 6e-11 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 27035 CAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTC 27094 ||| || | ||| | ||||| || ||||||||||||||||| || | || | || Sbjct 4473625 CAACACAAGATGAAGAGTAGACTCCTTTTGAATATTGTAGTCAGACAAAGTACGTCCATC 4473566 Query 27095 TTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATC 27154 ||| || || || || || | || || | || ||||| || || | || || ||||| Sbjct 4473565 TTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATC 4473506 Query 27155 GGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGA 27214 ||||||| || | |||||| || || | || |||||| || || || || | Sbjct 4473505 CTGGATCTTGGCCTTTACATTTTCTATCGTATCCGAGGGTTCAACCTCGAGGGTGATGGT 4473446 Query 27215 TTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || ||||| || |||||||| || || ||||| Sbjct 4473445 CTTCCCCGTAAGGGTTTTCACGAAAATCTGCAT 4473413 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424866432273888