Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colobus_20angolensis_20palliatus_20[refseq_20GCF_5F000951035.1_20201
5-03-12] 13,124 sequences; 2,970,124,662 total letters
Query= NC_028099.1
Length=122522
Score E
Sequences producing significant alignments: (Bits) Value
seq6472 141 7e-29
seq7015 120 2e-22
>seq6472
Length=2227648
Score = 141 bits (156), Expect = 7e-29
Identities = 225/320 (70%), Gaps = 2/320 (1%)
Strand=Plus/Minus
Query 111563 AAATAGCAACATCCATCTTTATAGCAGGATGAGGTCTATAATTCTCCAAT-TCAAAGTCA 111621
||| ||| | ||||| || |||| ||||| || | || || |||| | ||||||
Sbjct 2220128 AAACAGCCATTTCCATTTTAATAGTTGGATGCGGATTGTACC-CTTCAATCTGAAAGTCT 2220070
Query 111622 TCAGCAACAAAATCGTCAATGCAAGCAACTCTTCGTTTAATTTTTAGTTTTGGAAAGGGG 111681
||||| || || ||||| ||||| |||| ||| || || ||||| || ||
Sbjct 2220069 TCAGCTTTGAAGTCATCAATTTTCTCAACTTTTCGAAGAATCTTGAGCTTTGGGAAAGGT 2220010
Query 111682 GTAGGCTTTCGGGTAAGCTGTAATTGTAAAGGCTGTATGTGATTTAAATAAACATGCGCA 111741
| || | ||| |||||| | || | |||| |||||||| | |||| ||| |||
Sbjct 2220009 CTGGGTTCTCGCTGAAGCTGAATTTTCAGTGGCTCGATGTGATTCAGGTAAATATGTGCA 2219950
Query 111742 TCTCCTATACAATGGATCAATTCCCAAGGCTCCAAACCAGTGATGTGTGCAATCATGTAT 111801
||||| | | || | || || | |||| || || |||||||| |||||||||||
Sbjct 2219949 TCTCCCAAAGTGTGTACAAAGTCACCTGGCTTCAGGCCCGTGATGTGCGCAATCATGTAC 2219890
Query 111802 GTGAGTAGACTGTAACTAGCAATGTTAAATGGCACACCTAGGCCCATATCTCCCGATCTT 111861
||||| || ||| || || ||||| || ||||| ||||||||||| |||||||||||
Sbjct 2219889 GTGAGCAGGGCGTAGCTGGCGATGTTGAAAGGCACGCCTAGGCCCATGTCTCCCGATCTC 2219830
Query 111862 TGATATAGCTGACATGATAG 111881
|| || ||||| || || ||
Sbjct 2219829 TGGTACAGCTGGCAGGACAG 2219810
>seq7015
Length=9623085
Score = 120 bits (132), Expect = 2e-22
Identities = 122/159 (77%), Gaps = 0/159 (0%)
Strand=Plus/Minus
Query 111778 CCAGTGATGTGTGCAATCATGTATGTGAGTAGACTGTAACTAGCAATGTTAAATGGCACA 111837
|| |||||||| ||||||||||| |||||||| ||| || || ||||| || |||||
Sbjct 2250476 CCCGTGATGTGCGCAATCATGTACGTGAGTAGGGCGTAGCTGGCGATGTTGAAAGGCACG 2250417
Query 111838 CCTAGGCCCATATCTCCCGATCTTTGATATAGCTGACATGATAGTTTATTTTGTGACACA 111897
||||||||||| ||||||||||| || || ||||| || || || | | | | ||||
Sbjct 2250416 CCTAGGCCCATGTCTCCCGATCTCTGGTACAGCTGGCAGGACAGCTCACTGTTCACCACA 2250357
Query 111898 TAAAATTGACAAAGTACATGACAAGGAGGCAATGCCATC 111936
|| || || || || | || || ||||||| |||||||
Sbjct 2250356 TAGAACTGGCAGAGGGCGTGGCATGGAGGCAGTGCCATC 2250318
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 391882908791212
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |