Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colobus_20angolensis_20palliatus_20[refseq_20GCF_5F000951035.1_20201 5-03-12] 13,124 sequences; 2,970,124,662 total letters Query= NC_028238.1 Length=188534 Score E Sequences producing significant alignments: (Bits) Value seq5394 86.0 8e-12 seq5016 82.4 9e-11 >seq5394 Length=3718087 Score = 86.0 bits (94), Expect = 8e-12 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 32676 TGGTTATATTTTATCTCTAAAGGTATAGAATATCTAGATACTATTTTCTTCATAATGAGA 32735 |||| || ||| | |||||||| | || ||| | || || | || || || ||||| Sbjct 834310 TGGTGGTACTTTGTTTCTAAAGGAGTTGAGTATTTGGACACAGTGTTTTTTATTCTGAGA 834251 Query 32736 AAGAAATTTAACCAAGTTAGCTTTTTGCACGTATACCACCATTTTACCATGTTTACTTTA 32795 |||||| ||||||||| || | || || || || || | ||| |||||||| || Sbjct 834250 AAGAAAAACAACCAAGTTTCTTTCCTTCATGTGTATCATCACTGTACAATGTTTACCTTG 834191 Query 32796 GGATGGATAGGGATTAAATGGTTTGCAGGAGGACA 32830 | ||||| || ||||| ||| ||||||||||||| Sbjct 834190 TGGTGGATTGGAATTAAGTGGGTTGCAGGAGGACA 834156 >seq5016 Length=4328724 Score = 82.4 bits (90), Expect = 9e-11 Identities = 137/198 (69%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 22637 TTCTCTTATTTCTGGATGCGCTATTTTTTCAAATATAAGTTGTGCTACTCTATCGCCCTT 22696 |||| ||||||||||| || ||| | || || ||||| || ||| ||||| Sbjct 108922 TTCTTCTATTTCTGGATAAAAAATCCATTCGCAAATGAGCTGTGCAGTTCAATCACCCTT 108863 Query 22697 ATTTACGTAAAATACATCCTTACTAAAATTAAATAACAATATACCTATATTTCCCCTGTA 22756 || || | ||| || || | ||| ||||| | | | ||| | |||||| || || Sbjct 108862 TTTGACTTCAAACTTTTCTTTGCCAAAGTTAAACAGTACAACACCAACATTTCCTCTATA 108803 Query 22757 ATCTCTATCTATCACACCCGCGCCTACATCGATAAAATGATTACATGCCAATCCCGATCT 22816 |||| |||||| ||||| || |||||||| ||||| || || ||||| || || | Sbjct 108802 ATCTTCATCTATGACACCAGCTCCTACATCAATAAAGTGTTTTGCAGCCAAGCCTGACCA 108743 Query 22817 AGGAGATATTCTTCCATA 22834 |||| || ||||||||| Sbjct 108742 TGGAGCTACTCTTCCATA 108725 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 603081848189760