Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Daubentonia_20madagascariensis_20[genbank_20GCA_5F000241425.1_202012
-01-05] 3,231,305 sequences; 2,855,365,987 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq2442838 91.5 3e-13
seq2116759 91.5 3e-13
seq2846380 89.7 1e-12
seq397165 89.7 1e-12
seq3212251 87.8 4e-12
seq1606946 87.8 4e-12
seq421647 84.2 4e-11
>seq2442838
Length=696
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768
|||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||
Sbjct 682 TGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 623
Query 165769 CCCCACGATGGGC 165781
||||||| |||||
Sbjct 622 CCCCACGTTGGGC 610
>seq2116759
Length=288
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 165708 TTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGA 165767
||||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||
Sbjct 216 TTGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGA 275
Query 165768 GCCCCACGATGGG 165780
|||||||| ||||
Sbjct 276 GCCCCACGTTGGG 288
>seq2846380
Length=453
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768
|||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||
Sbjct 382 TGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 441
Query 165769 CCCCACGATGGG 165780
||||||| ||||
Sbjct 442 CCCCACGTTGGG 453
>seq397165
Length=645
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||||
Sbjct 372 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 313
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 312 CCCACGTTGGGC 301
>seq3212251
Length=233
Score = 87.8 bits (96), Expect = 4e-12
Identities = 62/71 (87%), Gaps = 0/71 (0%)
Strand=Plus/Plus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||||
Sbjct 163 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 222
Query 165770 CCCACGATGGG 165780
|||||| ||||
Sbjct 223 CCCACGTTGGG 233
>seq1606946
Length=6282
Score = 87.8 bits (96), Expect = 4e-12
Identities = 63/73 (86%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768
|||||| |||| |||||||||||||| ||||| ||||||| |||||||||||||||
Sbjct 2046 TGCCCGGCTAGTTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 1987
Query 165769 CCCCACGATGGGC 165781
||||||| |||||
Sbjct 1986 CCCCACGTTGGGC 1974
>seq421647
Length=586
Score = 84.2 bits (92), Expect = 4e-11
Identities = 63/74 (85%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 165708 TTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGA 165767
||||||| ||| ||||||||||||||| ||||| ||||||| ||||||||||||||
Sbjct 423 TTGCCCGGCTAACTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGA 364
Query 165768 GCCCCACGATGGGC 165781
|||||| | |||||
Sbjct 363 GCCCCATGTTGGGC 350
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1014028927752150
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |