Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Daubentonia_20madagascariensis_20[genbank_20GCA_5F000241425.1_202012
-01-05] 3,231,305 sequences; 2,855,365,987 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq1557410 163 3e-35
seq1615235 96.9 3e-15
>seq1557410
Length=8730
Score = 163 bits (180), Expect = 3e-35
Identities = 395/596 (66%), Gaps = 13/596 (2%)
Strand=Plus/Plus
Query 16946 AGATGTTTAAACATCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGT 17005
|| ||||| |||||||| || || || || ||| |||| ||||| |||||||| |||||
Sbjct 6814 AGGTGTTTGAACATCAGGCAGGCAAAGTCACAACGTAAACCCTCATCTCTGCTAGTAAGT 6873
Query 17006 TCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCG 17065
|| | |||||||| | || |||||| ||||| |||||||| ||| ||||||| ||
Sbjct 6874 TCATAGGAAAATGTGAGGCCAGGCATCAGTCCTCATTTCTTTAGCCAGAATATCGATGCA 6933
Query 17066 AACGACCCAGAAAAGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTAC 17125
|| | ||||||||||| || || || || | ||||| || | | |||| ||||
Sbjct 6934 AAAAAACCAGAAAAGAAGATGCCTTCCACTGCGGCAAAGGCTACAACATGTTCTCCGTAG 6993
Query 17126 GTCGCGTCTTTGTTACGAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCC 17185
|| || ||||||| | |||||| | ||| || || || || | ||| |
Sbjct 6994 GTAGCCTCTTTGTCCCCAATCCAACACAAGGTCCAATCCGCCTTCATCTAGACACAAGGC 7053
Query 17186 ATCGTTTCTATGGCCTT--AAATAATTTCTCTTTTTCCTGTAG-GTCGATTATATACGTA 17242
|||||||| ||||| || | | || ||| |||| || ||| || | || || ||
Sbjct 7054 ATCGTTTCAATGGCATTGAAGAGAAATTCCCTTT---CTTTAGAATCTTTAATGTAAGTG 7110
Query 17243 TCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAA 17302
|| || | || || ||||| | || || ||||| | |||| || || || || ||
Sbjct 7111 TCAATAAAAAGACTATACATCTTAGAATGCATGTTTTTTGTGGCAATTTGGAAGCCATAG 7170
Query 17303 AAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTC 17362
|| || |||||| |||||||| | || | || | | || || ||
Sbjct 7171 AAACAGTAGGCTTC-------TGAACTTCTTGGCCAAAATGCGCCACCAAGTTGTCATTT 7223
Query 17363 ACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATATTTTTCGTCC 17422
|| ||| ||| || || || || || |||| | | | ||||||| | | | ||
Sbjct 7224 ACTGTGCTGTCACTTGCTGCAAAGAAAGCCAGAACACGAGATATGAAATGTCTCTTCTCA 7283
Query 17423 GGTGTAAGAACGCGCCAGTCCTTTAAATCTTTGGATATATCCACTTCTTCGGGGGTCCAA 17482
|| | | | ||||| || | || ||||| | |||||| || || | ||||||
Sbjct 7284 GGCTTCTGGGCTTCCCAGTGCTAAATGTCCTTGGAAAGATCCACCTCCTCCGCCGTCCAA 7343
Query 17483 AAACTAGCCACTGCCTTTTTATACATATTCCAAATATCATTGTATTGTATGGGGAA 17538
|| || | | || || |||||||| ||||||||||| ||||| || |||||
Sbjct 7344 AAGGAAGGCTCAGCTTTCTTATACATTCACCAAATATCATGGTATTCAATAGGGAA 7399
>seq1615235
Length=3244
Score = 96.9 bits (106), Expect = 3e-15
Identities = 94/121 (78%), Gaps = 0/121 (0%)
Strand=Plus/Minus
Query 16986 CCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCT 17045
|||| |||||||| |||||||| || |||||||| | || |||||| |||||||||||
Sbjct 3113 CCTCATCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCT 3054
Query 17046 TTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAACG 17105
| | ||| ||||| | || || || ||||||||||| || || || || | ||||| |
Sbjct 3053 TGAGCCAGAATATTGATGCAAAAGAACCAGAAAAGAAGATGCCTTCCACTGCAGCAAAGG 2994
Query 17106 C 17106
|
Sbjct 2993 C 2993
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496641253937400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |