Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Daubentonia_20madagascariensis_20[genbank_20GCA_5F000241425.1_202012
-01-05] 3,231,305 sequences; 2,855,365,987 total letters
Query= NC_001993.1
Length=236120
Score E
Sequences producing significant alignments: (Bits) Value
seq394582 95.1 2e-14
seq1799193 89.7 7e-13
>seq394582
Length=1925
Score = 95.1 bits (104), Expect = 2e-14
Identities = 117/160 (73%), Gaps = 0/160 (0%)
Strand=Plus/Plus
Query 205381 ATATGATTAACATATATATGTGCATTACCAATATTATGAATAAATTCATATGGTTTTAAA 205440
|| || || | ||| || ||||||| |||| |||| | ||| ||| ||||||||
Sbjct 708 ATGTGGTTGAGATAAATGTGTGCATCTCCAAGTGTATGCACAAAATCACCCGGTTTTAAG 767
Query 205441 TTAGTTAAATGTGCAATCATATAAGTCAATAAACTATAACTAGCAACATTAAATGGTACA 205500
| |||| ||||||||||| ||||||| | ||||||||| ||||||||||| ||
Sbjct 768 TCTGTTAGGTGTGCAATCATGTAAGTCAGCAGTGAATAACTAGCCACATTAAATGGAACC 827
Query 205501 CCTAAACCCATATCAGCTGATCTTTGATACATTTGACATG 205540
|| | ||||| || | ||||| ||||| | |||||||
Sbjct 828 CCCAGGCCCATGTCCCCCGATCTCTGATAAAGCTGACATG 867
>seq1799193
Length=4297
Score = 89.7 bits (98), Expect = 7e-13
Identities = 147/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
||| | || || ||||| | || ||||| || || || ||| | ||| ||||| |
Sbjct 1876 ATGTAGATTTTCATAAAAATCCTTACAGGGAAGACCATCACTCTTGAGGTTGAACCCTCG 1935
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
||||||| ||| |||| || ||||| ||||| ||||| || || |||||||||
Sbjct 1936 GATACAAGAGAAAATGTAAAGGCCAAGATTCAGGATAAGGAAGGAATTCCTCCTGATCAA 1995
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
||||| || |||||||| | || ||| |||| ||| | | || || || || ||
Sbjct 1996 CAAAGACTAATTTTTGCTTGCAAGCAACTAGAAGATGGACATACTTTGTCTGACTACAAC 2055
Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTT 124750
|||||||| | || ||| | ||| | || ||
Sbjct 2056 ATTCAAAAGAAGTCCACTCTTCATCTTGTGTT 2087
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 724942140624000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |