Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Daubentonia_20madagascariensis_20[genbank_20GCA_5F000241425.1_202012
-01-05] 3,231,305 sequences; 2,855,365,987 total letters
Query= NC_002188.1
Length=288539
Score E
Sequences producing significant alignments: (Bits) Value
seq1521424 104 4e-17
>seq1521424
Length=9149
Score = 104 bits (114), Expect = 4e-17
Identities = 105/133 (79%), Gaps = 4/133 (3%)
Strand=Plus/Minus
Query 52057 GCATTTTTTGGAGCTCAGCTAAATTCTTTTATCCATGTTATTATGTACACTTATTATGGT 52116
|||||||||||||| ||| | ||||| ||||||||||| ||||||||| | || |||||
Sbjct 1240 GCATTTTTTGGAGCCCAGATGAATTCCTTTATCCATGTGATTATGTACTCCTACTATGGG 1181
Query 52117 ATGGCCGCTTGTGGTCCTATG--TTCAGAAAGTATCTATGGTGGAAACGTTATCTTACTA 52174
| | || | ||| || ||| |||| ||||||||| ||||||||||| || || || |
Sbjct 1180 TTAACTGCATTTGGCCC-ATGGATTCA-AAAGTATCTTTGGTGGAAACGATACCTGACCA 1123
Query 52175 TAATGCAGTTGGT 52187
| ||||| ||||
Sbjct 1122 TGTTGCAGCTGGT 1110
Score = 100 bits (110), Expect = 5e-16
Identities = 115/155 (74%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 51901 TGGTTGTACTATATATCCAAAGGGATAGAATACTTGGATACGGTATTTTTCATACTTAGG 51960
|||| ||||| | |||| ||||| | || || ||||| ||||| ||||| || || |||
Sbjct 3255 TGGTGGTACTTTGTATCTAAAGGAGTTGAGTATTTGGACACGGTGTTTTTTATCCTGAGG 3196
Query 51961 AAAAAATTTAATCAGGTTAGTTTTCTACACGTATATCATCATTTTACTATGTTTACTCTA 52020
|| ||| || || ||| ||| || || ||||||||||| | ||| |||||||| |
Sbjct 3195 AAGAAAAACAACCAAGTTTCTTTCCTTCATGTATATCATCACTGTACAATGTTTACATTG 3136
Query 52021 GGATGGATAGGTATTAAATGGTTTGCTGGAGGTCA 52055
| ||||| || ||||| ||| |||| || || ||
Sbjct 3135 TGGTGGATTGGAATTAAGTGGGTTGCAGGGGGACA 3101
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 885907669552200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |