Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Daubentonia_20madagascariensis_20[genbank_20GCA_5F000241425.1_202012
-01-05] 3,231,305 sequences; 2,855,365,987 total letters
Query= NC_002331.1
Length=178733
Score E
Sequences producing significant alignments: (Bits) Value
seq2966554 102 9e-17
seq2088725 100 3e-16
seq1707844 100 3e-16
seq2867966 98.7 1e-15
seq2357195 98.7 1e-15
seq2317585 98.7 1e-15
seq2244086 98.7 1e-15
seq1549391 98.7 1e-15
seq758197 98.7 1e-15
seq2942895 95.1 1e-14
seq2677557 95.1 1e-14
seq2349039 95.1 1e-14
seq2326289 89.7 6e-13
seq1602686 87.8 2e-12
>seq2966554
Length=363
Score = 102 bits (112), Expect = 9e-17
Identities = 67/74 (91%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 60064 TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 60123
|||||| || | ||||||||||||| ||||||||||||||||||||| |||||||||||
Sbjct 290 TTCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCAC 349
Query 60124 TATACTACCGAGGA 60137
||||||| ||||||
Sbjct 350 TATACTAACGAGGA 363
>seq2088725
Length=241
Score = 100 bits (110), Expect = 3e-16
Identities = 67/75 (89%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 60063 TTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCA 60122
|| |||| || | ||||||||||||| ||||||||||||||||||||| ||||||||||
Sbjct 167 TTGCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCA 226
Query 60123 CTATACTACCGAGGA 60137
|||||||| ||||||
Sbjct 227 CTATACTAACGAGGA 241
>seq1707844
Length=2135
Score = 100 bits (110), Expect = 3e-16
Identities = 66/73 (90%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124
||||| || | ||||||||||||| ||||||||||||||||||||| ||||||||||||
Sbjct 73 TCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 14
Query 60125 ATACTACCGAGGA 60137
|||||| ||||||
Sbjct 13 ATACTAACGAGGA 1
>seq2867966
Length=202
Score = 98.7 bits (108), Expect = 1e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | ||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 131 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 190
Query 60126 TACTACCGAGGA 60137
||||| ||||||
Sbjct 191 TACTAACGAGGA 202
>seq2357195
Length=297
Score = 98.7 bits (108), Expect = 1e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | ||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 297 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 238
Query 60126 TACTACCGAGGA 60137
||||| ||||||
Sbjct 237 TACTAACGAGGA 226
>seq2317585
Length=1104
Score = 98.7 bits (108), Expect = 1e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | ||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 72 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 13
Query 60126 TACTACCGAGGA 60137
||||| ||||||
Sbjct 12 TACTAACGAGGA 1
>seq2244086
Length=293
Score = 98.7 bits (108), Expect = 1e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | ||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 286 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 227
Query 60126 TACTACCGAGGA 60137
||||| ||||||
Sbjct 226 TACTAACGAGGA 215
>seq1549391
Length=6551
Score = 98.7 bits (108), Expect = 1e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | ||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 5473 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 5532
Query 60126 TACTACCGAGGA 60137
||||| ||||||
Sbjct 5533 TACTAACGAGGA 5544
>seq758197
Length=273
Score = 98.7 bits (108), Expect = 1e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | ||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 42 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 101
Query 60126 TACTACCGAGGA 60137
||||| ||||||
Sbjct 102 TACTAACGAGGA 113
>seq2942895
Length=677
Score = 95.1 bits (104), Expect = 1e-14
Identities = 58/62 (94%), Gaps = 0/62 (0%)
Strand=Plus/Minus
Query 60076 GGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTACCGAG 60135
||||||||||||| ||||||||||||||||||||| |||||||||||||||||| ||||
Sbjct 677 GGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTATACTAACGAG 618
Query 60136 GA 60137
||
Sbjct 617 GA 616
>seq2677557
Length=202
Score = 95.1 bits (104), Expect = 1e-14
Identities = 132/184 (72%), Gaps = 1/184 (1%)
Strand=Plus/Plus
Query 43000 GAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTC 43059
|||| ||||| || | ||||| | | || || ||| | || || || ||||| || |
Sbjct 6 GAATGTTGTAGTCGGAAAGAGTGTGGCCATCCTCCAGCCGTTTGCCTGCAAATATCAGAC 65
Query 43060 GCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCG 43119
||||||||||| || | || ||||||||| |||||| ||||| || | | |
Sbjct 66 ACTGCTGGTCGG-GGGGATGCCCTCCTTGTCTTGGATTTTGGCTTTGACGTTCTCGATGG 124
Query 43120 TGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTT 43179
|||| || | ||||| |||| |||||||| ||||| || || ||||| || ||||| |
Sbjct 125 TGTCACTGGGCTCCACCTCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCT 184
Query 43180 GCAT 43183
||||
Sbjct 185 GCAT 188
>seq2349039
Length=288
Score = 95.1 bits (104), Expect = 1e-14
Identities = 58/62 (94%), Gaps = 0/62 (0%)
Strand=Plus/Minus
Query 60076 GGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTACCGAG 60135
||||||||||||| ||||||||||||||||||||| |||||||||||||||||| ||||
Sbjct 282 GGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTATACTAACGAG 223
Query 60136 GA 60137
||
Sbjct 222 GA 221
>seq2326289
Length=510
Score = 89.7 bits (98), Expect = 6e-13
Identities = 57/62 (92%), Gaps = 0/62 (0%)
Strand=Plus/Minus
Query 60076 GGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTACCGAG 60135
||||||||||||| ||||||||||||||||||||| |||||||||||||||| | ||||
Sbjct 507 GGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTATACAAACGAG 448
Query 60136 GA 60137
||
Sbjct 447 GA 446
>seq1602686
Length=11169
Score = 87.8 bits (96), Expect = 2e-12
Identities = 67/78 (86%), Gaps = 1/78 (1%)
Strand=Plus/Plus
Query 60064 TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 60123
|||||| || | |||| ||||||||||||||||| ||||||||| || |||||||||||
Sbjct 46 TTCTCC-CGTCGGGGACTCGAACCCTGGTCTCCCACGTGACAGGTGGGGATACTCACCAC 104
Query 60124 TATACTACCGAGGATTGA 60141
||||||| ||||| |||
Sbjct 105 TATACTAATGAGGAATGA 122
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 548721136625400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |