Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Daubentonia_20madagascariensis_20[genbank_20GCA_5F000241425.1_202012
-01-05] 3,231,305 sequences; 2,855,365,987 total letters
Query= NC_002593.1
Length=100999
Score E
Sequences producing significant alignments: (Bits) Value
seq1627958 84.2 1e-11
seq2677557 82.4 5e-11
>seq1627958
Length=3316
Score = 84.2 bits (92), Expect = 1e-11
Identities = 136/193 (70%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 34199 TCTTTCTGTATGTTGTAGTCGGACA-GCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAA 34257
||||||| ||||||||||| |||| | || || | || |||| ||| || || || ||
Sbjct 284 TCTTTCTAGATGTTGTAGTCAGACACGGTG-CGTCCATCTTCCAGCTGTTTCCCGGCAAA 226
Query 34258 AATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATC 34317
|| | || |||||| || ||| | || |||||||| |||||| ||| | ||
Sbjct 225 GATCAACCTCTGCTGATCAGGGGGGATGCCTTCCTTGTCTTGGATCTTTGCCTTGACATT 166
Query 34318 GGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377
| || | || | | ||||| || | ||||||| ||||| || || || |||||
Sbjct 165 CTCAATGGTGTCACTGGGCTCGACTTCAAGGGTGATGGCCTTGCCAGTCAGGGTCTTCAC 106
Query 34378 AAAGATCTGCATC 34390
|||||||||||||
Sbjct 105 AAAGATCTGCATC 93
>seq2677557
Length=202
Score = 82.4 bits (90), Expect = 5e-11
Identities = 135/191 (71%), Gaps = 3/191 (2%)
Strand=Plus/Plus
Query 34201 TTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAAT 34260
|||| | |||||||||||||| || || | || |||| | | |||||||| || ||
Sbjct 1 TTTCCGAATGTTGTAGTCGGAAAGAGTGTGGCCATCCTCCAGCCGTTTGCCTGCAAATAT 60
Query 34261 GAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATCGG 34319
|| | |||||||||| ||| | || ||||||||| || ||| ||||| | |
Sbjct 61 CAGACACTGCTGGTCG-GGGGGATGCCCTCCTTGTCTTGGAT-TTTGGCTTTGACGTTCT 118
Query 34320 CTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAA 34379
| || | || | | || || || | |||||||| ||||| || || || ||||| |
Sbjct 119 CGATGGTGTCACTGGGCTCCACCTCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGA 178
Query 34380 AGATCTGCATC 34390
|||||||||||
Sbjct 179 AGATCTGCATC 189
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 310348930440800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |