Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Daubentonia_20madagascariensis_20[genbank_20GCA_5F000241425.1_202012
-01-05] 3,231,305 sequences; 2,855,365,987 total letters
Query= NC_002816.1
Length=123500
Score E
Sequences producing significant alignments: (Bits) Value
seq1627958 107 1e-18
seq1537392 95.1 9e-15
seq2677557 93.3 3e-14
>seq1627958
Length=3316
Score = 107 bits (118), Expect = 1e-18
Identities = 151/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 45125 AATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCG 45184
|| ||||||||||| ||| ||| |||| ||||||||||| || ||| | ||
Sbjct 305 AAGACCAAGTGCAGGGTGGACTCTTTCTAGATGTTGTAGTCAGACACGGTGCGTCCATCT 246
Query 45185 TCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244
||||| ||||| ||||| || ||||||| ||| || || || || | || ||||||||
Sbjct 245 TCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGATCAGGGGGGATGCCTTCCTTGTCT 186
Query 45245 GCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTC 45304
|| ||| ||| || | | | | |||| | ||| || || | ||| || | |
Sbjct 185 TGGATCTTTGCCTTGACATTCTCAATGGTGTCACTGGGCTCGACTTCAAGGGTGATGGCC 126
Query 45305 TTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
||||| ||||| |||||||||||||| |||||
Sbjct 125 TTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 94
>seq1537392
Length=19804
Score = 95.1 bits (104), Expect = 9e-15
Identities = 145/207 (70%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 45130 CAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAG 45189
||||||||| ||| ||| ||||| ||||||||||| ||| | | | || | ||
Sbjct 12066 CAAGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGTGTCCATCTTTCAC 12007
Query 45190 TTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAAT 45249
||||| || || || ||||| | ||| || || ||| | | || |||||||| ||
Sbjct 12006 CTGTTTCCCAGCAAAGATCAAACTCTGCTGATCAGGAAGGATGCCTTCCTTGTCTTGGAT 11947
Query 45250 TTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCC 45309
|||| | | || | | | | |||| ||| ||||| | ||| || ||||||||
Sbjct 11946 CTTTTCCATGACATTCTCAATGGTGTCATTGGGCTCTACCTCGAGGGTGATGGTCTTGCC 11887
Query 45310 CGTCAGAGTCTTCACAAAGATTTGCAT 45336
||||| |||||||||||||| |||||
Sbjct 11886 GGTCAGGGTCTTCACAAAGATCTGCAT 11860
>seq2677557
Length=202
Score = 93.3 bits (102), Expect = 3e-14
Identities = 134/188 (71%), Gaps = 1/188 (1%)
Strand=Plus/Plus
Query 45149 TTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATC 45208
||| |||||||||||||| || | | | || ||||| |||| || || ||||||
Sbjct 2 TTCCGAATGTTGTAGTCGGAAAGAGTGTGGCCATCCTCCAGCCGTTTGCCTGCAAATATC 61
Query 45209 AACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCC 45268
| | ||| |||||||| || | ||||||||||| ||||| || || | |
Sbjct 62 AGACACTGCTGGTCGGG-GGGATGCCCTCCTTGTCTTGGATTTTGGCTTTGACGTTCTCG 120
Query 45269 ACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAG 45328
| | |||| | ||||||||| | ||| || |||||||| ||||| |||||||| |||
Sbjct 121 ATGGTGTCACTGGGCTCCACCTCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAG 180
Query 45329 ATTTGCAT 45336
|| |||||
Sbjct 181 ATCTGCAT 188
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 379516534282405
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |