Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Daubentonia_20madagascariensis_20[genbank_20GCA_5F000241425.1_202012
-01-05] 3,231,305 sequences; 2,855,365,987 total letters
Query= NC_003083.1
Length=118584
Score E
Sequences producing significant alignments: (Bits) Value
seq1627958 102 6e-17
seq1537392 86.0 5e-12
seq2031399 84.2 2e-11
>seq1627958
Length=3316
Score = 102 bits (112), Expect = 6e-17
Identities = 148/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176
|||| ||| || || || ||||| | ||||||||||| | || || | |||||||
Sbjct 302 ACCAAGTGCAGGGTGGACTCTTTCTAGATGTTGTAGTCAGACACGGTGCGTCCATCTTCC 243
Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCA 18236
| ||||| || ||| |||| | || || ||||| ||| | ||||||||| ||
Sbjct 242 AGCTGTTTCCCGGCAAAGATCAACCTCTGCTGATCAGGGGGGATGCCTTCCTTGTCTTGG 183
Query 18237 ATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTG 18296
|| | | |||||| | ||| ||||||| ||||||| ||||| ||||||| |||
Sbjct 182 ATCTTTGCCTTGACATTCTCAATGGTGTCACTGGGCTCGACTTCAAGGGTGATGGCCTTG 123
Query 18297 CCGGTCAATGTTTTTACAAAAATTTGCAT 18325
|| |||| || || ||||| || |||||
Sbjct 122 CCAGTCAGGGTCTTCACAAAGATCTGCAT 94
>seq1537392
Length=19804
Score = 86.0 bits (94), Expect = 5e-12
Identities = 143/207 (69%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 18119 CATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAA 18178
|| ||| || || || ||||| || ||||||||||| | || || | | ||||| ||
Sbjct 12066 CAAGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGTGTCCATCTTTCAC 12007
Query 18179 TTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAAT 18238
||||| || ||| |||| | || || ||||| | | ||||||||| || ||
Sbjct 12006 CTGTTTCCCAGCAAAGATCAAACTCTGCTGATCAGGAAGGATGCCTTCCTTGTCTTGGAT 11947
Query 18239 TTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCC 18298
| || | |||| | ||| |||||| |||||| || | ||||||| | |||||
Sbjct 11946 CTTTTCCATGACATTCTCAATGGTGTCATTGGGCTCTACCTCGAGGGTGATGGTCTTGCC 11887
Query 18299 GGTCAATGTTTTTACAAAAATTTGCAT 18325
||||| || || ||||| || |||||
Sbjct 11886 GGTCAGGGTCTTCACAAAGATCTGCAT 11860
>seq2031399
Length=344
Score = 84.2 bits (92), Expect = 2e-11
Identities = 166/245 (68%), Gaps = 2/245 (1%)
Strand=Plus/Minus
Query 18086 TTCTTTTTGTTATC--CTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGA 18143
||| |||| ||| | | || || ||||| | || | ||||| || || || ||||||
Sbjct 263 TTCCTTTTCTTAGCACCACCACGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGA 204
Query 18144 ATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTT 18203
||||||||||| | || || | |||||||| ||| ||||| ||| | || ||||||
Sbjct 203 ATGTTGTAGTCAGACAAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAAATCAGTCTT 144
Query 18204 TGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTG 18263
|| ||||| || | ||||||||||| || | ||| || | | | | ||
Sbjct 143 TGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATTGTA 84
Query 18264 TCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGC 18323
|| ||| ||| || | ||||| | || || || | |||||||| ||||| |||
Sbjct 83 TCCGAGGGTTCGACCTCGAGAGTGATAGTCTTCCCTGTAAGGGTTTTTACGAAAATCTGC 24
Query 18324 ATTTT 18328
|| ||
Sbjct 23 ATCTT 19
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 364404853002225
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |