Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Daubentonia_20madagascariensis_20[genbank_20GCA_5F000241425.1_202012
-01-05] 3,231,305 sequences; 2,855,365,987 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq394582 178 2e-39
seq1615235 93.3 8e-14
>seq394582
Length=1925
Score = 178 bits (196), Expect = 2e-39
Identities = 426/636 (67%), Gaps = 9/636 (1%)
Strand=Plus/Minus
Query 35168 GGAACTCTATCCATTTTTGGACCCCAAATGAGGTTCTCTCTTCGAGACGACACTATTCCA 35227
|| ||||| || | ||||| | || | |||| ||| || ||| |||| |||||
Sbjct 1333 GGCACTCTCTCTGTCTTTGGCTCACAGAGCAGGTACTCCCTAAGAG--GACA--ATTCCC 1278
Query 35228 GTTCT-CACTACCAAGAAAATTTTCTGGAGAGGAGTTGTGGAAGAACTCTCGTGGTTCAT 35286
|| | ||| || |||| | | || ||| | || ||| |||| ||||| ||||| |
Sbjct 1277 TTTGTTCACAACTAAGAGAGTCTTTTGGCGGGGTGTTCTGGAGGAACTTCTATGGTTTGT 1218
Query 35287 CAGGGGCAATACAGACGCCAAAGAATTGGCCAAGAAGAAGATACACATCTGGAACGCTAA 35346
|||| ||| || ||||||| | | ||| | || |||||||| |||| ||
Sbjct 1217 TCGGGGGTCAACAAACTCCAAAGAGCTTTCATCAAAGGGGGTAAACATCTGGGACGCCAA 1158
Query 35347 TGGGTCGCGGGAATTTTTGGACAGTAGAGGGTTATACG-ATAGAGCAGAGGGAGATTTGG 35405
||| || | || ||||| |||| | | |||| || ||||| | ||||| || |||
Sbjct 1157 TGGCTCTAGAGACTTTTTAGACAA-ACACGGTTTCACTCATAGAACCGAGGGTGACCTGG 1099
Query 35406 GACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGAATAT-GATACCTGTTCTTCC 35464
|||| | || || || || ||| | || ||||| || || || || || || || |
Sbjct 1098 GACCTATCTATGGCTTTCAGTGGAGGCACTTTGGAGCAGACTACAGAGACATGAACT-CA 1040
Query 35465 GATTATACTGGAAAGGGTATTGATCAATTGGCCAATATACTAAAGACCCTGAGAGAAAAT 35524
|||||| ||||| | || ||||| ||| | ||| | | | || | ||| | |||
Sbjct 1039 GATTATTCTGGACAAGGGATTGACCAACTACAAAATGTGATTGACACGATCAGAAAGAAT 980
Query 35525 CCAGATGATAGAAGGATGATTATGACGGCATGGAATCCTATGGATCTTCACCTTATGGCT 35584
|| ||| || || || || || || |||||||| | ||| ||| ||| |||||
Sbjct 979 CCCAGTGACAGGAGAATCATATTGTGTGCCTGGAATCCCAAGGACCTTTCCCTGATGGCC 920
Query 35585 CTTCCTCCATGCCACATGACTGCTCAATTTTATGTGGCTAATGGAGAATTGTCGTGCCAG 35644
|| ||||| || |||| || ||||||||||||||||||||||| ||||| || |||
Sbjct 919 CTGCCTCCCTGTCACACCCTAGCCCAATTTTATGTGGCTAATGGAGAGTTGTCATGTCAG 860
Query 35645 TTGTATCAGCGAAGCGGAGATGTCGGGTTGGGCGTGCCCTTCAATATTGCATCATACTCT 35704
| |||||| || || || | || |||| || || || ||| | || || ||
Sbjct 859 CTTTATCAGAGATCGGGGGACATGGGCCTGGGGGTTCCATTTAATGTGGCTAGTTATTCA 800
Query 35705 CTTCTGACTCATCTGATGGCCAGTATGGTGGGTCTAAAACCGGGAGAGTTTATCCTCACT 35764
|| |||||| | |||| || | | |||||||||| || ||| | | ||
Sbjct 799 CTGCTGACTTACATGATTGCACACCTAACAGACTTAAAACCGGGTGATTTTGTGCATACA 740
Query 35765 CTTGGTGACGCACACATTTATAATACCCACATTGAG 35800
||||| || |||||||||||| | |||||| |||
Sbjct 739 CTTGGAGATGCACACATTTATCTCAACCACATAGAG 704
>seq1615235
Length=3244
Score = 93.3 bits (102), Expect = 8e-14
Identities = 84/106 (79%), Gaps = 0/106 (0%)
Strand=Plus/Plus
Query 101916 TTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCT 101975
|||| |||||||||||||| ||||| ||||||||| |||| | || ||||| || ||||
Sbjct 2988 TTGTAGCCTTTGCTGCAGTGGAAGGCATCTTCTTTTCTGGTTCTTTTGCATCAATATTCT 3047
Query 101976 GGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGA 102021
|| ||||||| | || | ||||||| ||||| | ||||||||
Sbjct 3048 GGCTCAAGAAACGAGGACTGATGCCTGGCCTCACATTTTCCAATGA 3093
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 948614138496275
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |