Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daubentonia_20madagascariensis_20[genbank_20GCA_5F000241425.1_202012 -01-05] 3,231,305 sequences; 2,855,365,987 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq1557410 91.5 1e-13 >seq1557410 Length=8730 Score = 91.5 bits (100), Expect = 1e-13 Identities = 124/173 (72%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 22750 GCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGCTG 22809 |||||||| || || |||||| || | |||||||| | ||||| | ||||||||||| Sbjct 6974 GCCTTTGCCGCAGTGGAAGGCATCTTCTTTTCTGGTTTTTTTGCATCGATATTCTGGCTA 6915 Query 22810 AAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACGAA 22869 |||||| | || ||||| || | | |||||| | || | | |||| | || || Sbjct 6914 AAGAAATGAGGACTGATGCCTGGCCTCACATTTTCCTATGAACTTACTAGCAGAGATGAG 6855 Query 22870 GGTCTACACTGTGACTTTGCTTGTATGCTGTTTAGGCAAATGGCAAACAAACC 22922 ||| ||| ||||||||||| || || |||| | || ||| | ||||||| Sbjct 6854 GGTTTACGTTGTGACTTTGCCTGCCTGATGTTCAAACACCTGGTACACAAACC 6802 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 342204575905915