Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Daubentonia_20madagascariensis_20[genbank_20GCA_5F000241425.1_202012
-01-05] 3,231,305 sequences; 2,855,365,987 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq1537392 100 3e-16
seq2031399 95.1 1e-14
seq2677557 87.8 2e-12
>seq1537392
Length=19804
Score = 100 bits (110), Expect = 3e-16
Identities = 148/207 (71%), Gaps = 2/207 (1%)
Strand=Plus/Minus
Query 139559 AAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGC-TCGAGTCTTCGAG 139617
||||| | || |||||||| || ||||| || || || ||| || | |||| |
Sbjct 12065 AAGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGTGTCCA-TCTTTCAC 12007
Query 139618 CTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGAT 139677
|||||| |||||| |||||| || |||||||| ||| | |||||||| ||||| |||
Sbjct 12006 CTGTTTCCCAGCAAAGATCAAACTCTGCTGATCAGGAAGGATGCCTTCCTTGTCTTGGAT 11947
Query 139678 TTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCC 139737
|||| | | | || | ||||| ||||||| ||||| | ||| | ||||||||
Sbjct 11946 CTTTTCCATGACATTCTCAATGGTGTCATTGGGCTCTACCTCGAGGGTGATGGTCTTGCC 11887
Query 139738 GGTCAACGTTTTTACGAATATTTGCAT 139764
||||| || || || || || |||||
Sbjct 11886 GGTCAGGGTCTTCACAAAGATCTGCAT 11860
>seq2031399
Length=344
Score = 95.1 bits (104), Expect = 1e-14
Identities = 145/204 (71%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 139562 TGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGC-TCGAGTCTTCGAGCTG 139620
|||| || ||||| ||||||||||| || || || || | || | ||||| || ||
Sbjct 224 TGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGTCCA-TCTTCCAGTTG 166
Query 139621 TTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTT 139680
|| |||||| | ||||| | ||||||||| ||||| || ||||| || || ||| ||
Sbjct 165 CTTGCCAGCAAAAATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATCTT 106
Query 139681 TTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGT 139740
|||| | ||| | ||| || | ||| || ||||| | || | ||||| || ||
Sbjct 105 GGCCTTTACATTTTCTATTGTATCCGAGGGTTCGACCTCGAGAGTGATAGTCTTCCCTGT 46
Query 139741 CAACGTTTTTACGAATATTTGCAT 139764
| ||||||||||| || |||||
Sbjct 45 AAGGGTTTTTACGAAAATCTGCAT 22
>seq2677557
Length=202
Score = 87.8 bits (96), Expect = 2e-12
Identities = 113/155 (73%), Gaps = 1/155 (1%)
Strand=Plus/Plus
Query 139610 TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 139669
|| || ||| |||| || ||| | ||||||| ||||| ||||| || ||||| || |||
Sbjct 35 TCCTCCAGCCGTTTGCCTGCAAATATCAGACACTGCTGGTCGGGGGG-ATGCCCTCCTTG 93
Query 139670 TCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACC 139729
|| |||||| ||| | | || | ||||| ||||||||||||| | ||| |
Sbjct 94 TCTTGGATTTTGGCTTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCGAGGGTGATG 153
Query 139730 GTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
|||||||| |||| || || ||||| || |||||
Sbjct 154 GTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 188
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476027323956000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |