Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Daubentonia_20madagascariensis_20[genbank_20GCA_5F000241425.1_202012
-01-05] 3,231,305 sequences; 2,855,365,987 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq394582 129 8e-25
>seq394582
Length=1925
Score = 129 bits (142), Expect = 8e-25
Identities = 379/584 (65%), Gaps = 0/584 (0%)
Strand=Plus/Minus
Query 69896 CCTCTGTTGACGACCAAGACTGTCTTTGTCAAGGGCGTCATCGAGGAGCTCTTGTGGATG 69955
||| |||| || || |||| |||||| ||| || | ||||| || | ||| |
Sbjct 1279 CCTTTGTTCACAACTAAGAGAGTCTTTTGGCGGGGTGTTCTGGAGGAACTTCTATGGTTT 1220
Query 69956 ATTTCCGGATCGACCAATGCCAAAGAGCTGAGCCGAAAGGGTGTACACATTTGGAGCGGC 70015
|| || || || || |||||||||| |||||| ||| |||| ||| || |
Sbjct 1219 GTTCGGGGGTCAACAAACTCCAAAGAGCTTTCATCAAAGGGGGTAAACATCTGGGACGCC 1160
Query 70016 AACAGTAGTCGAAGCGTTTTGGATTCGCTCGGCTTCACCGACAGACAAGAGGGCGATCTG 70075
|| | | || | |||| || | ||| ||||| | ||| ||||| || |||
Sbjct 1159 AATGGCTCTAGAGACTTTTTAGACAAACACGGTTTCACTCATAGAACCGAGGGTGACCTG 1100
Query 70076 GGGCCAGTGTACGGATTCCAGTGGAGGCACTCGGGCACCAAGTATGTAGACTGCGAGACA 70135
|| || | || || || ||||||||||||| || | | || |||| | ||
Sbjct 1099 GGACCTATCTATGGCTTTCAGTGGAGGCACTTTGGAGCAGACTACAGAGACATGAACTCA 1040
Query 70136 GACTATTCGGGTCAGGGTGTTGATCAATTGCAGACAATCATTGACACTCTCAAGACCAAT 70195
|| ||||| || || || |||| ||| | || | | |||||||| ||| | |||
Sbjct 1039 GATTATTCTGGACAAGGGATTGACCAACTACAAAATGTGATTGACACGATCAGAAAGAAT 980
Query 70196 CCAACAGATAGGAGGATCGTAATGTGCTCATGGAATCCTGCAGATTTGCACCAAATGGCA 70255
|| | || ||||| ||| || |||| | |||||||| || | || |||||
Sbjct 979 CCCAGTGACAGGAGAATCATATTGTGTGCCTGGAATCCCAAGGACCTTTCCCTGATGGCC 920
Query 70256 CTACCACCGTGTCACTGTTTGGCTCAGTTTTACTCGTACGATGGCAAATTGTCATGCTTA 70315
|| || || |||||| | || || ||||| | |||| | ||||||||
Sbjct 919 CTGCCTCCCTGTCACACCCTAGCCCAATTTTATGTGGCTAATGGAGAGTTGTCATGTCAG 860
Query 70316 ATGTATCAGAGGAGTGCCGACATGGGCCTCGGTGTACCCTTTAACATTGCAAGCTATTCT 70375
| |||||||| | ||||||||||| || || || ||||| | || || |||||
Sbjct 859 CTTTATCAGAGATCGGGGGACATGGGCCTGGGGGTTCCATTTAATGTGGCTAGTTATTCA 800
Query 70376 ATGTTGACGCACATGATTGCTCACATTACCGGCCTGAAAGCGCACGAGTTCGTACACACC 70435
|| |||| |||||||||| ||| | || | | | ||| || || || || || ||
Sbjct 799 CTGCTGACTTACATGATTGCACACCTAACAGACTTAAAACCGGGTGATTTTGTGCATACA 740
Query 70436 ATTGGCGACGCTCACGTGTATTTAAATCACATCGAGCCATTAAA 70479
|||| || || ||| | ||| | || ||||| ||||| ||||
Sbjct 739 CTTGGAGATGCACACATTTATCTCAACCACATAGAGCCTATAAA 696
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 711126846271800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |