Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daubentonia_20madagascariensis_20[genbank_20GCA_5F000241425.1_202012 -01-05] 3,231,305 sequences; 2,855,365,987 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq394582 129 8e-25 >seq394582 Length=1925 Score = 129 bits (142), Expect = 8e-25 Identities = 379/584 (65%), Gaps = 0/584 (0%) Strand=Plus/Minus Query 69896 CCTCTGTTGACGACCAAGACTGTCTTTGTCAAGGGCGTCATCGAGGAGCTCTTGTGGATG 69955 ||| |||| || || |||| |||||| ||| || | ||||| || | ||| | Sbjct 1279 CCTTTGTTCACAACTAAGAGAGTCTTTTGGCGGGGTGTTCTGGAGGAACTTCTATGGTTT 1220 Query 69956 ATTTCCGGATCGACCAATGCCAAAGAGCTGAGCCGAAAGGGTGTACACATTTGGAGCGGC 70015 || || || || || |||||||||| |||||| ||| |||| ||| || | Sbjct 1219 GTTCGGGGGTCAACAAACTCCAAAGAGCTTTCATCAAAGGGGGTAAACATCTGGGACGCC 1160 Query 70016 AACAGTAGTCGAAGCGTTTTGGATTCGCTCGGCTTCACCGACAGACAAGAGGGCGATCTG 70075 || | | || | |||| || | ||| ||||| | ||| ||||| || ||| Sbjct 1159 AATGGCTCTAGAGACTTTTTAGACAAACACGGTTTCACTCATAGAACCGAGGGTGACCTG 1100 Query 70076 GGGCCAGTGTACGGATTCCAGTGGAGGCACTCGGGCACCAAGTATGTAGACTGCGAGACA 70135 || || | || || || ||||||||||||| || | | || |||| | || Sbjct 1099 GGACCTATCTATGGCTTTCAGTGGAGGCACTTTGGAGCAGACTACAGAGACATGAACTCA 1040 Query 70136 GACTATTCGGGTCAGGGTGTTGATCAATTGCAGACAATCATTGACACTCTCAAGACCAAT 70195 || ||||| || || || |||| ||| | || | | |||||||| ||| | ||| Sbjct 1039 GATTATTCTGGACAAGGGATTGACCAACTACAAAATGTGATTGACACGATCAGAAAGAAT 980 Query 70196 CCAACAGATAGGAGGATCGTAATGTGCTCATGGAATCCTGCAGATTTGCACCAAATGGCA 70255 || | || ||||| ||| || |||| | |||||||| || | || ||||| Sbjct 979 CCCAGTGACAGGAGAATCATATTGTGTGCCTGGAATCCCAAGGACCTTTCCCTGATGGCC 920 Query 70256 CTACCACCGTGTCACTGTTTGGCTCAGTTTTACTCGTACGATGGCAAATTGTCATGCTTA 70315 || || || |||||| | || || ||||| | |||| | |||||||| Sbjct 919 CTGCCTCCCTGTCACACCCTAGCCCAATTTTATGTGGCTAATGGAGAGTTGTCATGTCAG 860 Query 70316 ATGTATCAGAGGAGTGCCGACATGGGCCTCGGTGTACCCTTTAACATTGCAAGCTATTCT 70375 | |||||||| | ||||||||||| || || || ||||| | || || ||||| Sbjct 859 CTTTATCAGAGATCGGGGGACATGGGCCTGGGGGTTCCATTTAATGTGGCTAGTTATTCA 800 Query 70376 ATGTTGACGCACATGATTGCTCACATTACCGGCCTGAAAGCGCACGAGTTCGTACACACC 70435 || |||| |||||||||| ||| | || | | | ||| || || || || || || Sbjct 799 CTGCTGACTTACATGATTGCACACCTAACAGACTTAAAACCGGGTGATTTTGTGCATACA 740 Query 70436 ATTGGCGACGCTCACGTGTATTTAAATCACATCGAGCCATTAAA 70479 |||| || || ||| | ||| | || ||||| ||||| |||| Sbjct 739 CTTGGAGATGCACACATTTATCTCAACCACATAGAGCCTATAAA 696 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 711126846271800