Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Daubentonia_20madagascariensis_20[genbank_20GCA_5F000241425.1_202012
-01-05] 3,231,305 sequences; 2,855,365,987 total letters
Query= NC_005038.1
Length=99657
Score E
Sequences producing significant alignments: (Bits) Value
seq2031399 98.7 6e-16
>seq2031399
Length=344
Score = 98.7 bits (108), Expect = 6e-16
Identities = 154/219 (70%), Gaps = 6/219 (3%)
Strand=Plus/Minus
Query 33157 CAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTC 33216
|||||| | ||| | || ||||| ||||| || ||||| ||||||||| | || ||
Sbjct 234 CAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGTCCATC 175
Query 33217 ATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTC 33276
|||| |||||| ||| ||| || | | |||||| || | || || ||||| || ||
Sbjct 174 TTCCAGTTGCTTGCCAGCAAAAATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATC 115
Query 33277 GCTAATC---GCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTAT 33333
||| |||| |||| ||| || || || ||||| || || ||||| ||
Sbjct 114 CTGGATCTTGGCCT---TTACATTTTCTATTGTATCCGAGGGTTCGACCTCGAGAGTGAT 58
Query 33334 CGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCATGTT 33372
|| || || ||||| |||||||||||||| ||||| ||
Sbjct 57 AGTCTTCCCTGTAAGGGTTTTTACGAAAATCTGCATCTT 19
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 306223650481890
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |