Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Daubentonia_20madagascariensis_20[genbank_20GCA_5F000241425.1_202012
-01-05] 3,231,305 sequences; 2,855,365,987 total letters
Query= NC_005336.1
Length=139962
Score E
Sequences producing significant alignments: (Bits) Value
seq1683812 152 4e-32
seq399366 86.0 5e-12
>seq1683812
Length=3291
Score = 152 bits (168), Expect = 4e-32
Identities = 125/152 (82%), Gaps = 0/152 (0%)
Strand=Plus/Plus
Query 128874 GGCTACCTCGGGTGCCAGGCACTCTCTGAGATGATACAGTTTTACTTGGAAGAGGTGATG 128933
|| ||||| || ||||| || | ||||||||||| ||||||||| |||| |||||||||
Sbjct 2047 GGTTACCTGGGTTGCCAAGCCTTGTCTGAGATGATCCAGTTTTACCTGGAGGAGGTGATG 2106
Query 128934 CCGCAGGCGGAAAATCACGGGCCGGACATCAAAGAGCACGTTAACTCGCTGGGAGAAAAG 128993
|||||||| || || ||||| || ||||||||||||||||| | ||| ||||||||||||
Sbjct 2107 CCGCAGGCTGAGAACCACGGCCCAGACATCAAAGAGCACGTGAGCTCCCTGGGAGAAAAG 2166
Query 128994 CTCAAAACGCTGCGTCTTCGACTGCGTCGCTG 129025
|| || | ||| | || || ||||| |||||
Sbjct 2167 CTGAAGAATCTGAGGCTGCGGCTGCGGCGCTG 2198
>seq399366
Length=1397
Score = 86.0 bits (94), Expect = 5e-12
Identities = 64/75 (85%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 129092 GCTGCAGGAACGAGGCGTTTACAAGGCCATGAGCGAGTTCGACATATTCATCAACTACAT 129151
|||||| || |||||| ||||| |||||||| ||||| ||||| ||||||||||||||
Sbjct 798 GCTGCAAGAGAAAGGCGTCTACAAAGCCATGAGTGAGTTTGACATCTTCATCAACTACAT 857
Query 129152 AGAATCATACATGAC 129166
|||| | ||||||||
Sbjct 858 AGAAACCTACATGAC 872
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430120378308915
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |