Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Daubentonia_20madagascariensis_20[genbank_20GCA_5F000241425.1_202012
-01-05] 3,231,305 sequences; 2,855,365,987 total letters
Query= NC_005337.1
Length=134431
Score E
Sequences producing significant alignments: (Bits) Value
seq1683812 136 3e-27
seq399366 89.7 4e-13
>seq1683812
Length=3291
Score = 136 bits (150), Expect = 3e-27
Identities = 116/143 (81%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 127171 GGGTGCCAAGCTCTGTCTGAGATGATTCAGTTCTACCTCGAAGAGGTCATGCCACAGGCA 127230
|| |||||||| ||||||||||||| ||||| ||||| || ||||| ||||| |||||
Sbjct 2056 GGTTGCCAAGCCTTGTCTGAGATGATCCAGTTTTACCTGGAGGAGGTGATGCCGCAGGCT 2115
Query 127231 GAAAATCACGGACCCGACATAAAAGAACACGTCAATTCCCTGGGTGAAAAGCTGAAGACA 127290
|| || ||||| || ||||| ||||| ||||| | |||||||| |||||||||||||
Sbjct 2116 GAGAACCACGGCCCAGACATCAAAGAGCACGTGAGCTCCCTGGGAGAAAAGCTGAAGAAT 2175
Query 127291 TTGAGACTTCGACTGCGTCGCTG 127313
|||| || || ||||| |||||
Sbjct 2176 CTGAGGCTGCGGCTGCGGCGCTG 2198
>seq399366
Length=1397
Score = 89.7 bits (98), Expect = 4e-13
Identities = 64/74 (86%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 127379 AGCTTCAGGAAAGAGGCGTGTACAAGGCCATGAGTGAGTTTGACATATTCATCAACTACA 127438
|||| || || | |||||| ||||| |||||||||||||||||||| |||||||||||||
Sbjct 797 AGCTGCAAGAGAAAGGCGTCTACAAAGCCATGAGTGAGTTTGACATCTTCATCAACTACA 856
Query 127439 TCGAGACTTACATG 127452
| || || ||||||
Sbjct 857 TAGAAACCTACATG 870
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 413118199879160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |