Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Daubentonia_20madagascariensis_20[genbank_20GCA_5F000241425.1_202012
-01-05] 3,231,305 sequences; 2,855,365,987 total letters
Query= NC_005832.1
Length=106332
Score E
Sequences producing significant alignments: (Bits) Value
seq394582 279 3e-70
seq1611918 156 3e-33
seq1921304 107 1e-18
seq1537755 93.3 3e-14
>seq394582
Length=1925
Score = 279 bits (308), Expect = 3e-70
Identities = 478/686 (70%), Gaps = 7/686 (1%)
Strand=Plus/Plus
Query 25283 TGCCATCCTCATCCTTATGGCGGGATGAGGGTCGTAACCCTCCAGGGAGAAATCCTCTGC 25342
||||||| ||| |||||| |||||| || | |||||||| | |||||||||
Sbjct 557 TGCCATCTCCATTTTTATGGTGGGATGTGGATTATAACCCTCTAAACTGAAATCCTCCCT 616
Query 25343 CTTAAAGTCGTCCAGGCTCTCCACCCTCCTGTTTATCCTCAGTGTGGGAAAGGGTCTGGG 25402
|||||||| || | | || |||| || | |||||||| |||||||| ||
Sbjct 617 TTTAAAGTCATCAATACAGCTAACTTTCCTCAGAATGGTTAGTGTGGGGAAGGGTCTTGG 676
Query 25403 CTCCCTCTCGAGCTGAGTCTTCAGCGGTTCTACGTGATCCAGGTAGACGTGAGCGTCTCC 25462
||||| | |||| | || | || |||| ||| | || || | ||| || |||||
Sbjct 677 GGTCCTCTGTAACTGAATTTTTATAGGCTCTATGTGGTTGAGATAAATGTGTGCATCTCC 736
Query 25463 CAGAGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTAACGTAAGCCATCATGTACGTGAG 25522
|| || || ||||| || ||||||| || | || | || || |||||||| || ||
Sbjct 737 AAGTGTATGCACAAAATCACCCGGTTTTAAGTCTGTTAGGTGTGCAATCATGTAAGTCAG 796
Query 25523 GAGAAAGTAGCTGGCGATGTTAAAGGGTACCCCGAACCCCATGTCCCCCCGACCTCTGGT 25582
|| | || || || | ||||| || ||||| | |||||||||||| || ||||| |
Sbjct 797 CAGTGAATAACTAGCCACATTAAATGGAACCCCCAGGCCCATGTCCCCC-GATCTCTGAT 855
Query 25583 AGAGCTGACACGAGAGCTCTTCGTCGCTCACGTAAAACTGACACATGGTGTAGCACGGAG 25642
| |||||||| || | |||| | | ||| ||||| || | ||||| || ||||
Sbjct 856 AAAGCTGACATGACAACTCTCCATTAGCCACATAAAATTGGGCTAGGGTGTGACAGGGAG 915
Query 25643 GAAGAGCTATAAGGCCCAAGTCTTTAGGGTTCCAGGCGCACACGATGATGCACCTGTCTT 25702
| || || || ||| | ||| || || |||||||| |||| ||||| | ||||||
Sbjct 916 GCAGGGCCATCAGGGAAAGGTCCTTGGGATTCCAGGCACACAATATGATTCTCCTGTCA- 974
Query 25703 CTGGG-TTGTCCCTGATAAGATCCGCGGTGTTTTGCAGCTGATCCACCCCCATCCCCGAG 25761
||||| || | ||||| || ||||| || || || | ||| || ||
Sbjct 975 CTGGGATTCTTTCTGATCGTGTCAATCACATTTTGTAGTTGGTCAATCCCTTGTCCAGAA 1034
Query 25762 TAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAATACCTCCACTGGAACCCGTACACC 25821
|| |||| ||||||| |||| |||||||| || | ||||||||| || || || |
Sbjct 1035 TAATCTGAGTTCATGTCTCTGTAGTCTGCTCCAAAGTGCCTCCACTGAAAGCCATAGATA 1094
Query 25822 GGTCCTAGGTCTCCATC--TTCCCTGTGCTCAAAGCCCCTCTTATCCAAAAAGTCTCTGG 25879
||||| ||||| || || ||| || | | ||| | | || || ||||||||||| |
Sbjct 1095 GGTCCCAGGTCACCCTCGGTTCTATGAG-TGAAACCGTGT-TTGTCTAAAAAGTCTCTAG 1152
Query 25880 AACCATTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACC 25939
| ||||||||||||||||| ||||||||||| || ||||||||||||||||| ||||
Sbjct 1153 AGCCATTGGCGTCCCAGATGTTTACCCCCTTTGATGAAAGCTCTTTGGAGTTTGTTGACC 1212
Query 25940 CTCTGACGAACCACAGCAGCTCCGCC 25965
| | || ||||| || || ||| ||
Sbjct 1213 CCCGAACAAACCATAGAAGTTCCTCC 1238
>seq1611918
Length=7152
Score = 156 bits (172), Expect = 3e-33
Identities = 381/577 (66%), Gaps = 19/577 (3%)
Strand=Plus/Minus
Query 25389 GGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCTACGTGATCCAGGTAG 25448
|| || ||||| || || | || |||||| |||||| || || | ||||| | |||
Sbjct 3713 GGGAATGGTCTTGGTTCTCGCTA-AGCTGAACCTTCAGTGGCTCAATGTGATTCTAGTAA 3655
Query 25449 ACGTGAGCGTCTCCCAGAGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTAACGTAAGCC 25508
| || || ||||||| ||| || ||||| || || || | ||| || || | || |||
Sbjct 3654 ATATGTGCATCTCCCAAAGTATGTACAAAGTCACCTGGCTTTAGACCAGTGATGTGAGC- 3596
Query 25509 ATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAAGGGTACCCCGAACCCCATGTCC 25568
|| |||||||| |||||| || || | || | ||||||||
Sbjct 3595 ---------------AGGGCGTAGCTGGTGATGTTGAACGGCATGCCCAGGCCCATGTCT 3551
Query 25569 CCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTTCGTCGCTCACGTAAAACTGACACAT 25628
|| ||| |||||| ||||| || || ||||| ||| ||| || ||||| || |
Sbjct 3550 CCT-GACG-CTGGTACAGCTGGCAGGACAGCTCACCGTTCACCACATAGAACTGGCAGAG 3493
Query 25629 GGTGTAGCACGGAGGAAGAGCTATAAGGCCCAAGTCTTTAGGGTTCCAGGCGCACACGAT 25688
|| | ||| | ||| || || || || | ||| | || ||||| || |||| |||
Sbjct 3492 GGCATGGCATGAAGGCAGTGCCATCAGAGGAAGATCTGTTGGATTCCAAGCACACATGAT 3433
Query 25689 GATGCACCTGTCTTCTGGGTTGTCCCTGATAAGATCCGCGGTGTTTTGCAGCTGATCCAC 25748
||| | ||||| || | |||| |||| ||| ||||| || || || ||
Sbjct 3432 GATTCTTCTGTCGTCAGAGTTGGTTTTGATGGCATCAATCACTTTTTGTAGTTGGTCAAC 3373
Query 25749 CCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAATACCTCCACTG 25808
|| || || || |||| ||| || |||| ||||| || |||| |||||||||
Sbjct 3372 TCCTTGACCTGAATAATCTGAATCCATATCTTTGTATTCTGCCCCAAAATGCCTCCACTG 3313
Query 25809 GAACCCGTACACCGGTCCTAGGTCTCCATCTTCCCTGTGCTCAAAGCCCCTCTTATCCAA 25868
||| | | || || || | ||| || ||| | ||| || ||| |||||
Sbjct 3312 GAAGTCAAAAACTGGGCCCAAGTCCCCTTCTCCTCTGGTGGAGAATCCCAGGCCATCCAG 3253
Query 25869 AAAGTCTCTGGAACCATTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGA 25928
|||||||| ||| || ||||| |||||||| || || ||||| || || ||||| |
Sbjct 3252 AAAGTCTCGGGACCCGTTGGCATCCCAGATTTTCACTCCCTTGGAAGACAGTTCTTTAGC 3193
Query 25929 GTTTGTGGACCCTCTGACGAACCACAGCAGCTCCGCC 25965
|||||||| || |||| ||||||||| |||| ||
Sbjct 3192 ATTTGTGGATCCCTTGACAGACCACAGCAACTCCTCC 3156
>seq1921304
Length=364
Score = 107 bits (118), Expect = 1e-18
Identities = 160/223 (72%), Gaps = 7/223 (3%)
Strand=Plus/Minus
Query 25491 AGCCCGGTAACGTAAGCCATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAAGGGT 25550
|| ||||| | || || |||||||||||||| || |||||||||||||| || ||
Sbjct 355 AGACCGGTGATGTGTGCGATCATGTACGTGAGCAGGGCCTAGCTGGCGATGTTGAACGGC 296
Query 25551 ACCCCGAACCCCATGTCCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTTCGTCGCT 25610
|| | | ||||||| | |||||| |||||| ||||| || || ||||| | |
Sbjct 295 ACGCTCAGGCCCATGT-CTCCCGACAGCTGGTACAGCTGGCAGGACAGCTCACCATTCAC 237
Query 25611 CACGTAAAACTGACACATGGTGTAGCACGGAGGAAGAGCTAT--AAGGCCCAAG-TCTTT 25667
|||||| ||||| || | | |||||||| || || || |||| ||| |||||
Sbjct 236 CACGTAGAACTGGCAGGGCGCATGACACGGAGGCAGCGCCATCAAAGG---AAGATCTTT 180
Query 25668 AGGGTTCCAGGCGCACACGATGATGCACCTGTCTTCTGGGTTG 25710
|| ||||| || |||| |||||| | ||||| || ||||||
Sbjct 179 TGGATTCCAAGCACACATGATGATTCTTCTGTCGTCAGGGTTG 137
>seq1537755
Length=8267
Score = 93.3 bits (102), Expect = 3e-14
Identities = 121/166 (73%), Gaps = 1/166 (1%)
Strand=Plus/Plus
Query 25490 TAGCCCGGTAACGTAAGCCATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAAGGG 25549
||| || || | || || |||||||| ||||| || ||||||||||||||| || ||
Sbjct 5592 TAGACCAGTGATGTGCGCAATCATGTATGTGAGCAGGGCGTAGCTGGCGATGTTGAACGG 5651
Query 25550 TACCCCGAACCCCATGTCCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTTCGTCGC 25609
|| || | ||||||| | || |||| |||||| ||||| || || ||||| |||
Sbjct 5652 CACGCCCAGGCCCATGT-CTCCTGACCGCTGGTACAGCTGGCAGGACAGCTCACCGTTCA 5710
Query 25610 TCACGTAAAACTGACACATGGTGTAGCACGGAGGAAGAGCTATAAG 25655
||| || ||||| || | || | ||||||||| || || || ||
Sbjct 5711 CCACATAGAACTGGCAGAGGGCATGGCACGGAGGCAGCGCCATCAG 5756
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 326742461007765
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |