Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daubentonia_20madagascariensis_20[genbank_20GCA_5F000241425.1_202012 -01-05] 3,231,305 sequences; 2,855,365,987 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq1815328 87.8 2e-12 >seq1815328 Length=3423 Score = 87.8 bits (96), Expect = 2e-12 Identities = 143/203 (70%), Gaps = 6/203 (3%) Strand=Plus/Minus Query 164502 AGGCTGTAAACATATAAAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACATT 164561 ||| ||||||||| | ||||| || | ||| ||||||| || ||||| ||||| || | Sbjct 2287 AGGTTGTAAACATGTTAAAGGCATCCTGTTATATGGACCCCCAGGTTGTGGTAAGACTCT 2228 Query 164562 AATGGCTCGATGCATTGCTCAAGCTTTTAAATC---GCGACCCGTTAAAATTGTTAATGG 164618 |||||||| |||| |||| | || ||| | || || || | || ||||| Sbjct 2227 CTTGGCTCGACAGATTGG-CAAGATGTTGAATGCAAGAGAGCCC--AAGGTGGTCAATGG 2171 Query 164619 TCCTGAATTATTGAACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTTCA 164678 || ||| | | ||||||||||| || || || |||||||| || | || | ||| Sbjct 2170 GCCAGAAATCCTTAACAAATATGTGGGAGAATCGGAAGCTAACATTCGTAAACTCTTTGC 2111 Query 164679 GGAGGCTGAAGAAGAACAAAAGA 164701 || |||||||| ||||||| || Sbjct 2110 TGATGCTGAAGAGGAACAAAGGA 2088 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571803947838000