Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Daubentonia_20madagascariensis_20[genbank_20GCA_5F000241425.1_202012
-01-05] 3,231,305 sequences; 2,855,365,987 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq1725941 105 2e-17
seq1615235 96.9 9e-15
seq1599774 86.0 2e-11
>seq1725941
Length=6718
Score = 105 bits (116), Expect = 2e-17
Identities = 115/153 (75%), Gaps = 0/153 (0%)
Strand=Plus/Minus
Query 364111 GCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATG 364170
|| ||| |||| |||| ||||||||| || || |||| ||||||||||| || || |||
Sbjct 1805 GCTCAGCAGCTTTGGTATGCCATCATTGAGTCTCAGACAGAGACAGGAACCCCATACATG 1746
Query 364171 TTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAG 364230
| ||||||||||| || || || ||| |||||||||| |||| || || || |
Sbjct 1745 CTCTACAAAGATTCCTGTAATCGGAAGAGCAACCAGCAGAACCTGGGAACCATCAAATGC 1686
Query 364231 AGCAACCTATGTACCGAGATTATTGAATACACC 364263
|||||||| || || || || | ||||| |||
Sbjct 1685 AGCAACCTGTGCACAGAAATAGTAGAATATACC 1653
>seq1615235
Length=3244
Score = 96.9 bits (106), Expect = 9e-15
Identities = 101/133 (76%), Gaps = 0/133 (0%)
Strand=Plus/Plus
Query 22489 GAACGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCA 22548
|||||| || | || ||||||| || |||||||| ||||||||||| | ||| ||
Sbjct 2981 GAACGTGTTGTAGCCTTTGCTGCAGTGGAAGGCATCTTCTTTTCTGGTTCTTTTGCATCA 3040
Query 22549 ATCTTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATT 22608
|| || ||||| || ||||| | | | ||||| || || || ||||| ||||| | |||
Sbjct 3041 ATATTCTGGCTCAAGAAACGAGGACTGATGCCTGGCCTCACATTTTCCAATGAACTTATT 3100
Query 22609 AGCCGAGATGAGG 22621
||| |||||||||
Sbjct 3101 AGCAGAGATGAGG 3113
>seq1599774
Length=14829
Score = 86.0 bits (94), Expect = 2e-11
Identities = 131/187 (70%), Gaps = 0/187 (0%)
Strand=Plus/Plus
Query 364952 AGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTT 365011
||| ||| |||| | |||| || || ||||||| |||| ||||| ||||||||||| |
Sbjct 8804 AGAGCATACCAGAAATTCCTGATGACCTGAAGCAACTTTATAAAACTGTATGGGAAATCT 8863
Query 365012 CCATGCGAACTCTCATTGATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGT 365071
| | |||| | | | ||||| ||||| | |||||||| || ||| |||||||
Sbjct 8864 CTCAGAAAACTGTTCTCAAGATGGCAGCCGAGAGAGGTGCTTTCATTGATCAAAGCCAGT 8923
Query 365072 CGTTTAACGTATTCATGACTCAGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACG 365131
| || ||| | || || |||| | || | ||| || || ||||| |||||||
Sbjct 8924 CTTTGAACATCCATATTGCTGAGCCTAACTATGGCAAACTCACTAGTATGCACTTCTACG 8983
Query 365132 GGTGGAA 365138
| |||||
Sbjct 8984 GCTGGAA 8990
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1249393333380510
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |