Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Daubentonia_20madagascariensis_20[genbank_20GCA_5F000241425.1_202012
-01-05] 3,231,305 sequences; 2,855,365,987 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq2031399 89.7 5e-13
seq1725941 82.4 7e-11
>seq2031399
Length=344
Score = 89.7 bits (98), Expect = 5e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | | || ||| | ||| | || |||||||||||||||||||| || |
Sbjct 248 CCACCACGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGAC 189
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| || || || || || |||||||| || | || | | ||||| || |||||
Sbjct 188 AAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAAATCAGTCTTTGCTGATCAGGAGGA 129
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|||||||| || || ||| || ||| | | || | ||||| | || ||||
Sbjct 128 ATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCGACC 69
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|||| || | || || || || || ||||||||||||||||||||
Sbjct 68 TCGAGAGTGATAGTCTTCCCTGTAAGGGTTTTTACGAAAATCTGCAT 22
>seq1725941
Length=6718
Score = 82.4 bits (90), Expect = 7e-11
Identities = 77/98 (79%), Gaps = 0/98 (0%)
Strand=Plus/Plus
Query 145670 TATTGTACGATCTCGGCGCACAAATTGCTACATTTGATGGTTCCCAGATTTTGCTGATTA 145729
|||| ||| || || | ||||| ||||| ||||||||||||||||| || ||||| ||
Sbjct 1657 TATTCTACTATTTCTGTGCACAGGTTGCTGCATTTGATGGTTCCCAGGTTCTGCTGGTTG 1716
Query 145730 CTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGG 145767
|| |||| || || | || |||||||||||||| ||
Sbjct 1717 CTCTTCCGATTACAGGAATCTTTGTAGAGCATGTATGG 1754
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 452947583491200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |