Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daubentonia_20madagascariensis_20[genbank_20GCA_5F000241425.1_202012 -01-05] 3,231,305 sequences; 2,855,365,987 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq1715087 82.4 6e-11 >seq1715087 Length=7196 Score = 82.4 bits (90), Expect = 6e-11 Identities = 113/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 25044 GAAGTGGAGTCGTCTGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGG 25103 || |||||| | |||||| |||||| ||||| || ||| || ||||||||| Sbjct 7194 GAGGTGGAGCCCAGTGACACCATCGAGAATGTGAAGGCCAAGATCCAGGATAAAGAAGGG 7135 Query 25104 ATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACT 25163 || || || ||||| ||| || | || ||||| ||||| || | ||||||| ||||||| Sbjct 7134 ATCCCCCCCGACCAGCAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGTCGCACT 7075 Query 25164 GTGGGCGATTACAATATTCAAAAAGAATCCACGCTACA 25201 | || ||||| || || ||||| || || || || Sbjct 7074 CTTTCTGACTACAACATCCAGAAAGAGTCAACCCTGCA 7037 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 416262880503575