Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Daubentonia_20madagascariensis_20[genbank_20GCA_5F000241425.1_202012
-01-05] 3,231,305 sequences; 2,855,365,987 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq1627958 161 2e-34
seq1537392 140 6e-28
seq2677557 118 2e-21
seq1715087 116 7e-21
seq2929101 114 2e-20
seq1799193 111 3e-19
seq1581579 111 3e-19
seq2357151 105 1e-17
seq2447078 96.9 6e-15
seq2955825 93.3 7e-14
seq1361224 86.0 1e-11
>seq1627958
Length=3316
Score = 161 bits (178), Expect = 2e-34
Identities = 172/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
||||| | | || ||| |||||||| || ||||||||||| | |||||| || || ||
Sbjct 320 CCTCCCCTGAAGCACAAGACCAAGTGCAGGGTGGACTCTTTCTAGATGTTGTAGTCAGAC 261
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
| || | |||||||| | ||| |||||||| || || | || || || || || ||
Sbjct 260 ACGGTGCGTCCATCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGATCAGGGGGG 201
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||||||||||||||| |||||||||||||| ||| |||||||| | || |||
Sbjct 200 ATGCCTTCCTTGTCTTGGATCTTTGCCTTGACATTCTCAATGGTGTCACTGGGCTCGACT 141
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | |||||||| || || || |||||||| || || ||||||||
Sbjct 140 TCAAGGGTGATGGCCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 94
>seq1537392
Length=19804
Score = 140 bits (154), Expect = 6e-28
Identities = 155/207 (75%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 68255 CAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAA 68314
|||||| || ||||||||||| |||||||| || || || || || ||||||| |
Sbjct 12066 CAAGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGTGTCCATCTTTCAC 12007
Query 68315 CTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAAT 68374
||| ||||| || || || | || || || || || | ||||||||||||||||| ||
Sbjct 12006 CTGTTTCCCAGCAAAGATCAAACTCTGCTGATCAGGAAGGATGCCTTCCTTGTCTTGGAT 11947
Query 68375 CTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCC 68434
|||| || |||| ||| |||||||| | ||||| || | ||||||||| || ||
Sbjct 11946 CTTTTCCATGACATTCTCAATGGTGTCATTGGGCTCTACCTCGAGGGTGATGGTCTTGCC 11887
Query 68435 CGTGAGGGTCTTGACGAATATCTGCAT 68461
|| |||||||| || || ||||||||
Sbjct 11886 GGTCAGGGTCTTCACAAAGATCTGCAT 11860
>seq2677557
Length=202
Score = 118 bits (130), Expect = 2e-21
Identities = 136/182 (75%), Gaps = 1/182 (1%)
Strand=Plus/Plus
Query 68280 ATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTT 68339
||||| || ||||| || || ||||| || | | | || || || ||||| || |
Sbjct 8 ATGTTGTAGTCGGAAAGAGTGTGGCCATCCTCCAGCCGTTTGCCTGCAAATATCAGACAC 67
Query 68340 TGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTG 68399
|| |||||||| ||| |||| ||||||||||| || || || |||||| ||||||||||
Sbjct 68 TGCTGGTCGGGGGGA-TGCCCTCCTTGTCTTGGATTTTGGCTTTGACGTTCTCGATGGTG 126
Query 68400 TCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGC 68459
|| | || || || | ||||||||| || || || |||||||| ||||| ||||||
Sbjct 127 TCACTGGGCTCCACCTCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGC 186
Query 68460 AT 68461
||
Sbjct 187 AT 188
>seq1715087
Length=7196
Score = 116 bits (128), Expect = 7e-21
Identities = 115/149 (77%), Gaps = 0/149 (0%)
Strand=Plus/Plus
Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312
|||| ||| || || |||||||| |||||||| || || || || || | ||||||||
Sbjct 7031 ACCAGGTGCAGGGTTGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGACCATCTTCC 7090
Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372
| |||||| || || || ||||| || || |||||||| || || ||||| || || ||
Sbjct 7091 AGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGGGATCCCTTCTTTATCCTGG 7150
Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTC 68401
||||| ||||| || ||||||||||||
Sbjct 7151 ATCTTGGCCTTCACATTCTCGATGGTGTC 7179
>seq2929101
Length=1797
Score = 114 bits (126), Expect = 2e-20
Identities = 147/203 (72%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312
|||| ||| || |||||||||| |||||||| ||||| || || || | ||||| ||
Sbjct 945 ACCAGGTGCAGAGTGGACTCTTCCTGGATGTTGTAATCTGAAAGAGTGCGGCCATCCTCC 1004
Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372
| ||| || | | ||||| || || ||||| ||||| || || |||||||||||
Sbjct 1005 AGCTGTTTATCCGAAAATATCAGATGCTGCTGGTCAGGTGGGATTCCCTCCTTGTCTTGG 1064
Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432
| || | ||||| |||||||||||| || | || || | ||| ||||| ||
Sbjct 1065 GTTTTGACTTTGACATTCTCGATGGTGTCACTGGACTTGACCTCAAGGGTTATGGTCTTG 1124
Query 68433 CCCGTGAGGGTCTTGACGAATAT 68455
||||| |||||||| || |||||
Sbjct 1125 CCCGTCAGGGTCTTCACCAATAT 1147
>seq1799193
Length=4297
Score = 111 bits (122), Expect = 3e-19
Identities = 157/221 (71%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 68241 CGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTC 68300
||||| | ||| || | || || ||||||| ||||| ||||| || || || | ||
Sbjct 2096 CGAAGTCTCAACACAAGATGAAGAGTGGACTTCTTTTGAATGTTGTAGTCAGACAAAGTA 2037
Query 68301 CTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCT 68360
|||||||||| ||||| | || || || ||||||||||| || || ||||| |||
Sbjct 2036 TGTCCATCTTCTAGTTGCTTGCAAGCAAAAATTAGTCTTTGTTGATCAGGAGGAATTCCT 1977
Query 68361 TCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAG 68420
||||| || |||||||| ||||| || || | || || | | ||| || || |
Sbjct 1976 TCCTTATCCTGAATCTTGGCCTTTACATTTTCTCTTGTATCCGAGGGTTCAACCTCAAGA 1917
Query 68421 GTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|||||||| || || || ||| | || | ||| |||| |||
Sbjct 1916 GTGATGGTCTTCCCTGTAAGGATTTTTATGAAAATCTACAT 1876
>seq1581579
Length=3724
Score = 111 bits (122), Expect = 3e-19
Identities = 157/221 (71%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
||||| | | || || |||| ||| || ||| ||||||| |||||||| || || ||
Sbjct 3026 CCTCCCCTCAAGCTCAGGACCAGGTGCAGGGTGAACTCTTTCTGGATGTTGTAGTCAGAC 2967
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | ||||| ||| | || ||||| ||| || || | | || || |||| ||
Sbjct 2966 AGGGTGCGCCCATGTTCCAGCTACTTCCTGGCAAAGATCAACCCCTGCTGATCGGAAGGG 2907
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||| ||||||||||||| |||||||||||||| | ||||||| || || ||
Sbjct 2906 ATGTCTTCCTTGTCTTGGATCTTTGCCTTGACATTTCCAGTGGTGTCACTGGACTCAACC 2847
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATAT 68455
| | ||||||| | || || || | |||||| | ||| ||
Sbjct 2846 TTGAGGGTGATGATCTTGCCAGTCAAGGTCTTCAGGAAGAT 2806
>seq2357151
Length=385
Score = 105 bits (116), Expect = 1e-17
Identities = 106/138 (77%), Gaps = 0/138 (0%)
Strand=Plus/Plus
Query 68324 GGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTT 68383
||| || || ||||| | || || || || ||||||||||||||||| |||||||||||
Sbjct 6 GGCAAAGATCAGTCTCCGCTGATCAGGAGGGATGCCTTCCTTGTCTTGGATCTTTGCCTT 65
Query 68384 GACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGT 68443
||| ||| |||||||| | || ||||| | |||||||| || || || |||||
Sbjct 66 GACATTCTCAATGGTGTCACTGGGCTCGACTTCAAGGGTGATGGCCTTGCCAGTCAGGGT 125
Query 68444 CTTGACGAATATCTGCAT 68461
||| || || ||||||||
Sbjct 126 CTTCACAAAGATCTGCAT 143
>seq2447078
Length=448
Score = 96.9 bits (106), Expect = 6e-15
Identities = 97/126 (77%), Gaps = 0/126 (0%)
Strand=Plus/Minus
Query 68337 CTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATG 68396
|| || || || || || ||||||||||||||||| |||||||||||||| |||||||
Sbjct 439 CTCTGCTGATCAGGGGGGATGCCTTCCTTGTCTTGGATCTTTGCCTTGACATTCTCGATG 380
Query 68397 GTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATC 68456
||||| | || || || | ||||||||| || || || | ||| || || || |||
Sbjct 379 GTGTCACTGGGCTCGACCTCAAGGGTGATGGTCTTGCCTGTCAAGGTTTTCACAAAGATC 320
Query 68457 TGCATT 68462
||||||
Sbjct 319 TGCATT 314
>seq2955825
Length=1785
Score = 93.3 bits (102), Expect = 7e-14
Identities = 106/141 (75%), Gaps = 1/141 (1%)
Strand=Plus/Minus
Query 68262 AGCGTGGACTCTTTTTGGATGTTATAATCGGAGA-GTGTCCTCCCATCTTCTAACTGCTT 68320
|| ||||||||||| |||||||| || || |||| | || | ||||| || | ||| ||
Sbjct 162 AGGGTGGACTCTTTCTGGATGTTGTAGTCTGAGACGAGTGCAGCCATCCTCCAGCTGTTT 103
Query 68321 CCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGC 68380
|| || ||||| || | || |||| ||||| ||||| |||||| |||| || || ||
Sbjct 102 GCCTGCAAATATTAGACGCTGCTGGTGAGGTGGGATGCCCTCCTTGCCTTGGATTTTGGC 43
Query 68381 CTTGACGGCCTCGATGGTGTC 68401
|||||| ||| ||| ||||
Sbjct 42 TTTGACGTTCTCCATGCTGTC 22
>seq1361224
Length=316
Score = 86.0 bits (94), Expect = 1e-11
Identities = 107/147 (73%), Gaps = 0/147 (0%)
Strand=Plus/Minus
Query 68319 TTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTT 68378
|| || || || | ||| || || ||||| || | || |||||||| || || |||||
Sbjct 316 TTGCCTGCAAAGACGAGACTCTGCTGGTCAGGGAGGATCCCTTCCTTATCCTGGATCTTG 257
Query 68379 GCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTG 68438
||||| ||| ||| | |||||| | || || ||||||||||| || || || ||
Sbjct 256 GCCTTCACGTTCTCAACGGTGTCACTGGGCTCCACCTCCAAGGTGATAGTCTTGCCAGTC 197
Query 68439 AGGGTCTTGACGAATATCTGCATTATG 68465
|||||||| || || || |||||| ||
Sbjct 196 AGGGTCTTTACAAAGATTTGCATTTTG 170
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 884396861634600
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