Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Daubentonia_20madagascariensis_20[genbank_20GCA_5F000241425.1_202012
-01-05] 3,231,305 sequences; 2,855,365,987 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq1557410 104 4e-17
seq1700391 93.3 8e-14
>seq1557410
Length=8730
Score = 104 bits (114), Expect = 4e-17
Identities = 178/256 (70%), Gaps = 2/256 (1%)
Strand=Plus/Minus
Query 42609 CTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAAC 42668
|| ||||| ||||| || |||||||| || || ||| ||||||||| ||| | |
Sbjct 7076 CTCTTCAATGCCATTGAAACGATGCCTTGTGTCTAGATGAAGGCGGATTGGACCTTGTGT 7017
Query 42669 TGGATCGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAG 42728
||||| | | || || || | ||| || | ||||||||| |||| || ||
Sbjct 7016 TGGATTGGGGACAAAGAGGCTACCTACGGAGAACATGTTGTAGCCTTTGCCGCAGTGGAA 6957
Query 42729 GGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGA-AGGTGTCGAT 42787
||||||||||| || || || || || || |||||||| ||| | ||| | |||
Sbjct 6956 GGCATCTTCTTTTCTGGTTTTTTTGCATCGATATTCTGGCTAAAGAAATGAGGACT-GAT 6898
Query 42788 GCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTT 42847
||| || ||||| || || | ||||| | ||||| || ||||| | | | | |||||
Sbjct 6897 GCCTGGCCTCACATTTTCCTATGAACTTACTAGCAGAGATGAGGGTTTACGTTGTGACTT 6838
Query 42848 TGCCTGCCTCCTGTTC 42863
||||||||| |||||
Sbjct 6837 TGCCTGCCTGATGTTC 6822
>seq1700391
Length=5054
Score = 93.3 bits (102), Expect = 8e-14
Identities = 97/125 (78%), Gaps = 2/125 (2%)
Strand=Plus/Minus
Query 42706 TGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCT 42765
|||| |||||| | || || || || || ||||||||||| | || || | || ||||
Sbjct 3362 TGGTCGCCTTTGCTGCTGTAGAAGGAATTTTCTTCTCGGGATCTTTTGCTGCTATATTCT 3303
Query 42766 GGCTCAAGCAGA-AGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGG 42824
|||| ||| ||| |||| | ||||| |||||||| || || || |||||||||||||||
Sbjct 3302 GGCTAAAGAAGAGAGGTCTT-ATGCCTGGACTCACTTTTTCCAATGAACTCATCAGCAGG 3244
Query 42825 GACGA 42829
|| ||
Sbjct 3243 GATGA 3239
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 906196100266800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |