Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Daubentonia_20madagascariensis_20[genbank_20GCA_5F000241425.1_202012
-01-05] 3,231,305 sequences; 2,855,365,987 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq2677557 95.1 1e-14
seq2966554 93.3 4e-14
seq2088725 91.5 2e-13
seq1707844 91.5 2e-13
seq2942895 89.7 5e-13
seq2867966 89.7 5e-13
seq2357195 89.7 5e-13
seq2349039 89.7 5e-13
seq2317585 89.7 5e-13
seq2244086 89.7 5e-13
seq1549391 89.7 5e-13
seq758197 89.7 5e-13
seq2326289 84.2 2e-11
>seq2677557
Length=202
Score = 95.1 bits (104), Expect = 1e-14
Identities = 132/184 (72%), Gaps = 1/184 (1%)
Strand=Plus/Plus
Query 42025 GAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTC 42084
|||| ||||| || | ||||| | | || || ||| | || || || ||||| || |
Sbjct 6 GAATGTTGTAGTCGGAAAGAGTGTGGCCATCCTCCAGCCGTTTGCCTGCAAATATCAGAC 65
Query 42085 GCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCG 42144
||||||||||| || | || ||||||||| |||||| ||||| || | | |
Sbjct 66 ACTGCTGGTCGG-GGGGATGCCCTCCTTGTCTTGGATTTTGGCTTTGACGTTCTCGATGG 124
Query 42145 TGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTT 42204
|||| || | ||||| |||| |||||||| ||||| || || ||||| || ||||| |
Sbjct 125 TGTCACTGGGCTCCACCTCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCT 184
Query 42205 GCAT 42208
||||
Sbjct 185 GCAT 188
>seq2966554
Length=363
Score = 93.3 bits (102), Expect = 4e-14
Identities = 65/74 (88%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 57005 TTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 57064
|||||| || | | |||||||||| ||||||||||||||||||||| |||||||||||
Sbjct 290 TTCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCAC 349
Query 57065 TATACTACCGAGGA 57078
||||||| ||||||
Sbjct 350 TATACTAACGAGGA 363
>seq2088725
Length=241
Score = 91.5 bits (100), Expect = 2e-13
Identities = 65/75 (87%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 57004 TTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCA 57063
|| |||| || | | |||||||||| ||||||||||||||||||||| ||||||||||
Sbjct 167 TTGCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCA 226
Query 57064 CTATACTACCGAGGA 57078
|||||||| ||||||
Sbjct 227 CTATACTAACGAGGA 241
>seq1707844
Length=2135
Score = 91.5 bits (100), Expect = 2e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065
||||| || | | |||||||||| ||||||||||||||||||||| ||||||||||||
Sbjct 73 TCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 14
Query 57066 ATACTACCGAGGA 57078
|||||| ||||||
Sbjct 13 ATACTAACGAGGA 1
>seq2942895
Length=677
Score = 89.7 bits (98), Expect = 5e-13
Identities = 55/59 (93%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 57020 AATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTACCGAGGA 57078
|||||||||| ||||||||||||||||||||| |||||||||||||||||| ||||||
Sbjct 674 AATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTATACTAACGAGGA 616
>seq2867966
Length=202
Score = 89.7 bits (98), Expect = 5e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066
|||| || | | |||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 131 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 190
Query 57067 TACTACCGAGGA 57078
||||| ||||||
Sbjct 191 TACTAACGAGGA 202
>seq2357195
Length=297
Score = 89.7 bits (98), Expect = 5e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066
|||| || | | |||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 297 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 238
Query 57067 TACTACCGAGGA 57078
||||| ||||||
Sbjct 237 TACTAACGAGGA 226
>seq2349039
Length=288
Score = 89.7 bits (98), Expect = 5e-13
Identities = 55/59 (93%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 57020 AATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTACCGAGGA 57078
|||||||||| ||||||||||||||||||||| |||||||||||||||||| ||||||
Sbjct 279 AATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTATACTAACGAGGA 221
>seq2317585
Length=1104
Score = 89.7 bits (98), Expect = 5e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066
|||| || | | |||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 72 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 13
Query 57067 TACTACCGAGGA 57078
||||| ||||||
Sbjct 12 TACTAACGAGGA 1
>seq2244086
Length=293
Score = 89.7 bits (98), Expect = 5e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066
|||| || | | |||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 286 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 227
Query 57067 TACTACCGAGGA 57078
||||| ||||||
Sbjct 226 TACTAACGAGGA 215
>seq1549391
Length=6551
Score = 89.7 bits (98), Expect = 5e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066
|||| || | | |||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 5473 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 5532
Query 57067 TACTACCGAGGA 57078
||||| ||||||
Sbjct 5533 TACTAACGAGGA 5544
>seq758197
Length=273
Score = 89.7 bits (98), Expect = 5e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066
|||| || | | |||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 42 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 101
Query 57067 TACTACCGAGGA 57078
||||| ||||||
Sbjct 102 TACTAACGAGGA 113
>seq2326289
Length=510
Score = 84.2 bits (92), Expect = 2e-11
Identities = 54/59 (92%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 57020 AATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTACCGAGGA 57078
|||||||||| ||||||||||||||||||||| |||||||||||||||| | ||||||
Sbjct 504 AATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTATACAAACGAGGA 446
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 521271722041200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |