Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daubentonia_20madagascariensis_20[genbank_20GCA_5F000241425.1_202012 -01-05] 3,231,305 sequences; 2,855,365,987 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq2677557 95.1 1e-14 seq2966554 93.3 4e-14 seq2088725 91.5 2e-13 seq1707844 91.5 2e-13 seq2942895 89.7 5e-13 seq2867966 89.7 5e-13 seq2357195 89.7 5e-13 seq2349039 89.7 5e-13 seq2317585 89.7 5e-13 seq2244086 89.7 5e-13 seq1549391 89.7 5e-13 seq758197 89.7 5e-13 seq2326289 84.2 2e-11 >seq2677557 Length=202 Score = 95.1 bits (104), Expect = 1e-14 Identities = 132/184 (72%), Gaps = 1/184 (1%) Strand=Plus/Plus Query 42025 GAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTC 42084 |||| ||||| || | ||||| | | || || ||| | || || || ||||| || | Sbjct 6 GAATGTTGTAGTCGGAAAGAGTGTGGCCATCCTCCAGCCGTTTGCCTGCAAATATCAGAC 65 Query 42085 GCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCG 42144 ||||||||||| || | || ||||||||| |||||| ||||| || | | | Sbjct 66 ACTGCTGGTCGG-GGGGATGCCCTCCTTGTCTTGGATTTTGGCTTTGACGTTCTCGATGG 124 Query 42145 TGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTT 42204 |||| || | ||||| |||| |||||||| ||||| || || ||||| || ||||| | Sbjct 125 TGTCACTGGGCTCCACCTCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCT 184 Query 42205 GCAT 42208 |||| Sbjct 185 GCAT 188 >seq2966554 Length=363 Score = 93.3 bits (102), Expect = 4e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 57005 TTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 57064 |||||| || | | |||||||||| ||||||||||||||||||||| ||||||||||| Sbjct 290 TTCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCAC 349 Query 57065 TATACTACCGAGGA 57078 ||||||| |||||| Sbjct 350 TATACTAACGAGGA 363 >seq2088725 Length=241 Score = 91.5 bits (100), Expect = 2e-13 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 57004 TTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCA 57063 || |||| || | | |||||||||| ||||||||||||||||||||| |||||||||| Sbjct 167 TTGCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCA 226 Query 57064 CTATACTACCGAGGA 57078 |||||||| |||||| Sbjct 227 CTATACTAACGAGGA 241 >seq1707844 Length=2135 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065 ||||| || | | |||||||||| ||||||||||||||||||||| |||||||||||| Sbjct 73 TCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 14 Query 57066 ATACTACCGAGGA 57078 |||||| |||||| Sbjct 13 ATACTAACGAGGA 1 >seq2942895 Length=677 Score = 89.7 bits (98), Expect = 5e-13 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 57020 AATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTACCGAGGA 57078 |||||||||| ||||||||||||||||||||| |||||||||||||||||| |||||| Sbjct 674 AATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTATACTAACGAGGA 616 >seq2867966 Length=202 Score = 89.7 bits (98), Expect = 5e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | |||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 131 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 190 Query 57067 TACTACCGAGGA 57078 ||||| |||||| Sbjct 191 TACTAACGAGGA 202 >seq2357195 Length=297 Score = 89.7 bits (98), Expect = 5e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | |||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 297 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 238 Query 57067 TACTACCGAGGA 57078 ||||| |||||| Sbjct 237 TACTAACGAGGA 226 >seq2349039 Length=288 Score = 89.7 bits (98), Expect = 5e-13 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 57020 AATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTACCGAGGA 57078 |||||||||| ||||||||||||||||||||| |||||||||||||||||| |||||| Sbjct 279 AATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTATACTAACGAGGA 221 >seq2317585 Length=1104 Score = 89.7 bits (98), Expect = 5e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | |||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 72 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 13 Query 57067 TACTACCGAGGA 57078 ||||| |||||| Sbjct 12 TACTAACGAGGA 1 >seq2244086 Length=293 Score = 89.7 bits (98), Expect = 5e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | |||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 286 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 227 Query 57067 TACTACCGAGGA 57078 ||||| |||||| Sbjct 226 TACTAACGAGGA 215 >seq1549391 Length=6551 Score = 89.7 bits (98), Expect = 5e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | |||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 5473 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 5532 Query 57067 TACTACCGAGGA 57078 ||||| |||||| Sbjct 5533 TACTAACGAGGA 5544 >seq758197 Length=273 Score = 89.7 bits (98), Expect = 5e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | |||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 42 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 101 Query 57067 TACTACCGAGGA 57078 ||||| |||||| Sbjct 102 TACTAACGAGGA 113 >seq2326289 Length=510 Score = 84.2 bits (92), Expect = 2e-11 Identities = 54/59 (92%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 57020 AATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTACCGAGGA 57078 |||||||||| ||||||||||||||||||||| |||||||||||||||| | |||||| Sbjct 504 AATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTATACAAACGAGGA 446 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521271722041200