Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Daubentonia_20madagascariensis_20[genbank_20GCA_5F000241425.1_202012
-01-05] 3,231,305 sequences; 2,855,365,987 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq1537392 104 2e-17
seq2031399 100 3e-16
>seq1537392
Length=19804
Score = 104 bits (114), Expect = 2e-17
Identities = 141/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|| |||||||| || || ||||| || || ||| | ||| | | |||||| |||
Sbjct 12056 GTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGTGTCCATCTTTCACCTGTTTCCCA 11997
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
|| ||||||| | ||||||||| ||| | ||||| |||||||| ||| || | | ||
Sbjct 11996 GCAAAGATCAAACTCTGCTGATCAGGAAGGATGCCTTCCTTGTCTTGGATCTTTTCCATG 11937
Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096
| | || | |||||| | ||| || |||| ||| | || ||||||||||| ||
Sbjct 11936 ACATTCTCAATGGTGTCATTGGGCTCTACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTC 11877
Query 127097 TTTACAAAAATCTGCAT 127113
|| ||||| ||||||||
Sbjct 11876 TTCACAAAGATCTGCAT 11860
>seq2031399
Length=344
Score = 100 bits (110), Expect = 3e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 126884 GCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCG 126943
|| ||||| || | || |||||| | ||| | || ||||| |||||||| ||||| ||
Sbjct 251 GCACCACCACGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCA 192
Query 126944 CCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGA 127003
|| || || ||| || || || || ||||| | |||| || |||||||| |||
Sbjct 191 GACAAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAAATCAGTCTTTGCTGATCAGGA 132
Query 127004 GGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCG 127063
|| || || ||||| ||| ||| || ||| | | ||| | || |||| |||
Sbjct 131 GGAATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCG 72
Query 127064 ACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| |||| || | || || || || || |||||||| |||||||||||
Sbjct 71 ACCTCGAGAGTGATAGTCTTCCCTGTAAGGGTTTTTACGAAAATCTGCAT 22
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 456294698593200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |