Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Daubentonia_20madagascariensis_20[genbank_20GCA_5F000241425.1_202012
-01-05] 3,231,305 sequences; 2,855,365,987 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq2031399 141 2e-28
seq1731777 134 3e-26
seq3019692 114 3e-20
seq1799193 109 1e-18
seq1715087 107 4e-18
seq1537392 102 2e-16
seq1749026 95.1 3e-14
seq1627958 95.1 3e-14
seq1983535 93.3 1e-13
seq1798963 91.5 3e-13
seq1531189 91.5 3e-13
>seq2031399
Length=344
Score = 141 bits (156), Expect = 2e-28
Identities = 162/218 (74%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
|||||||||| ||||| || ||||| ||||||||||| | ||||||||||| ||||||
Sbjct 242 CGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTA 183
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| |||||||||||| ||||| || || || || || | ||||| || ||| |||||||
Sbjct 182 CGTCCATCTTCCAGTTGCTTGCCAGCAAAAATCAGTCTTTGCTGATCAGGAGGAATTCCT 123
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| ||||| ||||| ||| || ||| | || || | | ||| || || |
Sbjct 122 TCCTTATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCGACCTCGAGA 63
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||| ||||| || || || ||||| || ||||| ||
Sbjct 62 GTGATAGTCTTCCCTGTAAGGGTTTTTACGAAAATCTG 25
Score = 91.5 bits (100), Expect = 3e-13
Identities = 80/100 (80%), Gaps = 0/100 (0%)
Strand=Plus/Plus
Query 200930 AAAAACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACG 200989
||| ||| || || || || ||||| ||||||||||| | |||||| | || ||||||
Sbjct 143 AAAGACTGATTTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTACAACA 202
Query 200990 TCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 201029
| || || ||||| |||||||| ||||| |||||||||||
Sbjct 203 TTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAGACTTCG 242
>seq1731777
Length=2471
Score = 134 bits (148), Expect = 3e-26
Identities = 165/225 (73%), Gaps = 3/225 (1%)
Strand=Plus/Plus
Query 199411 AAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCT 199470
|||||||| ||||| || ||||| ||||||||||| | ||||||||||| |||||| |
Sbjct 710 AAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACA 769
Query 199471 TCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTC 199530
||| |||||||| ||||| || || || || || | ||||| || |||| |||||||||
Sbjct 770 TCCGTCTTCCAGTTGCTTGCCAGCAAAAATCAGTCTTTGCTGATCAGGAAGAATTCCTTC 829
Query 199531 TCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGT 199590
| ||| ||||| || || || | ||||| | | ||| || || | ||
Sbjct 830 CTCATACTGGATCTTGGCTTTTACATTTTATATTGTGTCCGAGGGTTCAACCTCGAGAGT 889
Query 199591 GATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTGGTACATTTT 199635
||| ||||| ||| | || ||||| |||||||| || ||||||
Sbjct 890 GATGGTCTTCCCCATAAGGGTTTTTACAAAAATCTG---CATTTT 931
>seq3019692
Length=452
Score = 114 bits (126), Expect = 3e-20
Identities = 157/218 (72%), Gaps = 1/218 (0%)
Strand=Plus/Plus
Query 199410 GAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCC 199469
|||||||| |||||||| ||| | ||||||||||| | |||||||||| |||||| |
Sbjct 116 GAAGTCTCGACACAAGGTGAAGACTGGACTCCTTTTGAATGTTGTAGTCATACAAAGTAC 175
Query 199470 TTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTT 199529
|||||||||||| ||||| || || || || | | ||||| || ||| ||||||||
Sbjct 176 ATCCATCTTCCAGTTGCTTGCCAGCAAAAATCACTCTTTGCTGATCAGGAGGAATTCCTT 235
Query 199530 CTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACG 199589
| ||||| ||||| ||| || || | | |||| | ||| || | | |
Sbjct 236 CCTTATCCTGGATCTTGGCCTTTACATTTTGTATTATATCTGAGGGTTCAACCTTGAGAG 295
Query 199590 TGATCGTCTTACCC-GTGAGAGTTTTCACAAAAATTTG 199626
|||| | ||| ||| || ||| |||| |||||||| ||
Sbjct 296 TGATGGCCTTTCCCTGTAAGAATTTTTACAAAAATCTG 333
>seq1799193
Length=4297
Score = 109 bits (120), Expect = 1e-18
Identities = 153/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
|||||||||| ||||| || ||||| |||| |||||| | ||||||||||| ||||||
Sbjct 2096 CGAAGTCTCAACACAAGATGAAGAGTGGACTTCTTTTGAATGTTGTAGTCAGACAAAGTA 2037
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
||||||||| || ||||| | || || || || | || || || ||| |||||||
Sbjct 2036 TGTCCATCTTCTAGTTGCTTGCAAGCAAAAATTAGTCTTTGTTGATCAGGAGGAATTCCT 1977
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| ||||||||||| ||| || ||| || || | | ||| || || |
Sbjct 1976 TCCTTATCCTGAATCTTGGCCTTTACATTTTCTCTTGTATCCGAGGGTTCAACCTCAAGA 1917
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAAT 199623
||||| ||||| || || || |||| | |||||
Sbjct 1916 GTGATGGTCTTCCCTGTAAGGATTTTTATGAAAAT 1882
>seq1715087
Length=7196
Score = 107 bits (118), Expect = 4e-18
Identities = 115/152 (76%), Gaps = 0/152 (0%)
Strand=Plus/Plus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
|| || ||||| || || ||||| || |||| ||||||||||| | ||| | ||||||
Sbjct 7028 AGAACCAGGTGCAGGGTTGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGACCATCT 7087
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
||||||||||| || || |||||||| | ||||||||| || || |||||| |||
Sbjct 7088 TCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGGGATCCCTTCTTTATCC 7147
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTC 199569
|| ||||| |||||| |||| ||||||
Sbjct 7148 TGGATCTTGGCCTTCACATTCTCGATGGTGTC 7179
>seq1537392
Length=19804
Score = 102 bits (112), Expect = 2e-16
Identities = 143/201 (71%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 199426 GTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTG 199485
||| || || ||||| || |||| ||||||||||| || || |||||||| || |||
Sbjct 12063 GTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGTGTCCATCTTTCACCTG 12004
Query 199486 CTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTT 199545
|| || || ||||| | || |||||| || |||| || ||||| || || |||||
Sbjct 12003 TTTCCCAGCAAAGATCAAACTCTGCTGATCAGGAAGGATGCCTTCCTTGTCTTGGATCTT 11944
Query 199546 TTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGT 199605
|| | | || || | |||||| | | ||||| || | ||||| ||||| || ||
Sbjct 11943 TTCCATGACATTCTCAATGGTGTCATTGGGCTCTACCTCGAGGGTGATGGTCTTGCCGGT 11884
Query 199606 GAGAGTTTTCACAAAAATTTG 199626
|| || |||||||| || ||
Sbjct 11883 CAGGGTCTTCACAAAGATCTG 11863
>seq1749026
Length=2417
Score = 95.1 bits (104), Expect = 3e-14
Identities = 94/122 (77%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
|||||||||| |||| | ||| ||||||||||| ||||||||||||| ||||||
Sbjct 1727 CGAAGTCTCAACACAAAACAAAAAGTGGACTCCTTTTGAACGTTGTAGTCAGACAAAGTA 1668
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
|||||||||||| ||||| || || || || || | ||||||| ||| |||| ||
Sbjct 1667 TGTCCATCTTCCAGTTGCTTGCCAGCAAAAATCAGCCTTTGCTGGTTAGGAGGAATTTCT 1608
Query 199529 TC 199530
||
Sbjct 1607 TC 1606
>seq1627958
Length=3316
Score = 95.1 bits (104), Expect = 3e-14
Identities = 147/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476
|| ||| | ||| || || ||||| || | || ||||||||||| || || | ||||||
Sbjct 306 CAAGACCAAGTGCAGGGTGGACTCTTTCTAGATGTTGTAGTCAGACACGGTGCGTCCATC 247
Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536
||||||||| || ||||| ||||| | | |||||| || || || ||||| ||
Sbjct 246 TTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGATCAGGGGGGATGCCTTCCTTGTC 187
Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596
|| |||||| ||| || || | |||||| | | || || || | ||||| |
Sbjct 186 TTGGATCTTTGCCTTGACATTCTCAATGGTGTCACTGGGCTCGACTTCAAGGGTGATGGC 127
Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||| || || || || |||||||| || ||
Sbjct 126 CTTGCCAGTCAGGGTCTTCACAAAGATCTG 97
>seq1983535
Length=492
Score = 93.3 bits (102), Expect = 1e-13
Identities = 104/138 (75%), Gaps = 6/138 (4%)
Strand=Plus/Minus
Query 199410 GAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCC 199469
||||||||| ||||| || ||||| |||||||||| | |||||||||| |||| |
Sbjct 229 GAAGTCTCAACACAAGATGAAGAGTGCACTCCTTTTGAATGTTGTAGTCA----AAGTAC 174
Query 199470 TTCCATCTTCCAGCTGCTTTCCGGC--GAAGATGAGACGCTGCTGGTCCGGAAAAATTCC 199527
|||||||||||| ||||| || || || || || | ||||| || ||| ||||||
Sbjct 173 ATCCATCTTCCAGTTGCTTACCAGCAAAAAAATTAGTCTTTGCTGATCAGGAGGAATTCC 114
Query 199528 TTCTCGCTCCTGAATCTT 199545
||| ||||| |||||
Sbjct 113 TTCCTTATCCTGGATCTT 96
>seq1798963
Length=3269
Score = 91.5 bits (100), Expect = 3e-13
Identities = 152/219 (69%), Gaps = 7/219 (3%)
Strand=Plus/Plus
Query 199410 GAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCC 199469
||| ||||| | || || ||||| ||||| ||||| | ||||||||||| ||||||
Sbjct 1629 GAAATCTCAACATAAAATGAAGAGTGGACTCTTTTTGAATGTTGTAGTCAGGCAAAGTAT 1688
Query 199470 TTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTT 199529
||||| || ||| ||||| || || ||||| || | ||||| || ||| ||||| |||
Sbjct 1689 ATCCATATTACAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGAAATTTCTT 1748
Query 199530 CTCGCTCCTG--AATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAA 199587
||||| || | |||||| ||| | || | | | ||| || || |
Sbjct 1749 TCTTATCCTGGAAAGC-----CTTCACATTTTCTATTGTATTGGAGGGTTCAACCTCAAG 1803
Query 199588 CGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||| ||||| ||| | || ||||| ||||||| ||
Sbjct 1804 AGTGATGGTCTTCCCCATAAGGGTTTTTGCAAAAATCTG 1842
>seq1531189
Length=23303
Score = 91.5 bits (100), Expect = 3e-13
Identities = 94/122 (77%), Gaps = 1/122 (1%)
Strand=Plus/Minus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
|||||||||| |||| |||||||| ||||||||||| | ||||||||||| |||||
Sbjct 22457 CGAAGTCTCAACACAAAATGGAGAGTGGACTCCTTTTGAATGTTGTAGTCAGAGAAAGTA 22398
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| |||||||||||| | ||| || || || || || | | ||| | | | |||||||
Sbjct 22397 CATCCATCTTCCAG-TTCTTGCCAGCAAAAATCAGTCTTTACTGATTGGTAGGAATTCCT 22339
Query 199529 TC 199530
||
Sbjct 22338 TC 22337
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1130112954472435
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