Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daubentonia_20madagascariensis_20[genbank_20GCA_5F000241425.1_202012 -01-05] 3,231,305 sequences; 2,855,365,987 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq2677557 100 3e-16 >seq2677557 Length=202 Score = 100 bits (110), Expect = 3e-16 Identities = 132/182 (73%), Gaps = 1/182 (1%) Strand=Plus/Plus Query 46412 ATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGC 46471 || ||||||||||| |||||| | | || || ||| | ||||| || ||||||| | | Sbjct 8 ATGTTGTAGTCGGAAAGAGTGTGGCCATCCTCCAGCCGTTTGCCTGCAAATATCAGACAC 67 Query 46472 TGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTG 46531 |||||||||| || | || ||||||||| ||| || |||| || | | ||| Sbjct 68 TGCTGGTCGG-GGGGATGCCCTCCTTGTCTTGGATTTTGGCTTTGACGTTCTCGATGGTG 126 Query 46532 TCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGC 46591 || || | ||||| || | |||||||| ||||| ||||| || || || ||||| ||| Sbjct 127 TCACTGGGCTCCACCTCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGC 186 Query 46592 AT 46593 || Sbjct 187 AT 188 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 542407679148600