Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Daubentonia_20madagascariensis_20[genbank_20GCA_5F000241425.1_202012
-01-05] 3,231,305 sequences; 2,855,365,987 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq1557410 174 2e-38
seq2677557 107 2e-18
seq2929101 95.1 1e-14
seq1627958 95.1 1e-14
seq1715087 93.3 4e-14
seq1549142 89.7 5e-13
seq2955825 86.0 6e-12
seq1292660 84.2 2e-11
seq1615235 82.4 7e-11
>seq1557410
Length=8730
Score = 174 bits (192), Expect = 2e-38
Identities = 427/644 (66%), Gaps = 19/644 (3%)
Strand=Plus/Plus
Query 132871 TGCACCAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAA 132930
|| |||| || |||||||||| ||| |||||||| ||| | || ||||| || ||| |
Sbjct 6808 TGTACCAGGTGTTTGAACATCAGGCAGGCAAAGTCACAACGTAAACCCTCATCTCTGCTA 6867
Query 132931 ATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATG 132990
| ||||| | | || || | ||| ||||| || || | ||| || ||||| |||||
Sbjct 6868 GTAAGTTCATAGGAAAATGTGAGGCCAGGCATCAGTCCTCATTTCTTTAGCCAGAATATC 6927
Query 132991 GCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCG 133050
| || ||| || |||||||||| ||| || || || || || || || | | ||
Sbjct 6928 GATGCAAAAAAACCAGAAAAGAAGATGCCTTCCACTGCGGCAAAGGCTACAACATGTTCT 6987
Query 133051 CCGAACGTGGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACG 133110
||| | || || |||||| | ||||| | || | ||| || ||||| | |||
Sbjct 6988 CCGTAGGTAGCCTCTTTGTCCCCAATCCAACACAAGGTCCAATCCGCCTTCATCTAGACA 7047
Query 133111 CACGGCATCGTTTCGATGGCGTTCAACAAACGGAGTTTCTCTTCC--GAGGAAC--GCAC 133166
|| ||||||||||| ||||| || || | || ||| ||| | || | | |
Sbjct 7048 CAAGGCATCGTTTCAATGGCATTGAAGA----GAAATTCCCTTTCTTTAGAATCTTTAAT 7103
Query 133167 GTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAA 133226
||| ||||| || | |||||| | || || | ||| | |||| ||||| ||
Sbjct 7104 GTAAGTGTCAATAAAAAGACTATACATCTTAGAATGCATGTTTTTTGTGGCAATTTGGAA 7163
Query 133227 GCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATT 133286
||| || || || || | ||| |||||||| | ||| || | |||| ||
Sbjct 7164 GCCATAGAAACAGTAGGCTT-------CTGAACTTCTTGGCCAAAATGCGCCACCAAGTT 7216
Query 133287 TTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAG--CACGTGCTTGATGAAATGG 133344
|| || || ||| ||| || || || || || ||||| |||| | | ||||||||
Sbjct 7217 GTCATTTACTGTGCTGTCACTTGCTGCAAAGAAAGCCAGAACACGAGAT--ATGAAATGT 7274
Query 133345 CGCTCGTTGTCGTTCAAGCGCTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCG 133404
| || | ||| | ||||||| |||||||||| || |||||||||||
Sbjct 7275 CTCTTCTCAGGCTTCTGGGCTTCCCAGTGCTAAATGTCCTTGGAAAGATCCACCTCCTCC 7334
Query 133405 ACGGTCCAAAACGACGCCTCGGCTTTTTTGTACATACTCCACATGTCCGAATATTGTATG 133464
| |||||||| || | ||| ||||| || ||||| | ||| || || |||| ||
Sbjct 7335 GCCGTCCAAAAGGAAGGCTCAGCTTTCTTATACATTCACCAAATATCATGGTATTCAATA 7394
Query 133465 GGAAAAATCACAAACCGGCGGGGGTTTTCGCGCAACAGCGGCTC 133508
|| || || ||||| | |||||||||| | || ||| || ||
Sbjct 7395 GGGAAGATGACAAAGTGCTGGGGGTTTTCTCTCAGCAGTGGTTC 7438
>seq2677557
Length=202
Score = 107 bits (118), Expect = 2e-18
Identities = 136/183 (74%), Gaps = 3/183 (2%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || || || ||||| ||||||||| |||| || ||| |||
Sbjct 188 ATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTCGAGGTGGAGCCCAGT 129
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| | |||| ||||||| ||||| ||||| || ||| |||||||
Sbjct 128 GACACCATCGAGAACG-TCAAAGCCAAAATCCAAGACAAGGAGGGCATCCCC-CCGACCA 71
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||| | || || | || ||||||| |||||| || | | ||| || |||||||||
Sbjct 70 GCAGTGTCTGATATTTGCAGGCAAACGGCTGGAGGATGGCCACACTCTTTCCGACTACAA 11
Query 38423 CAT 38425
|||
Sbjct 10 CAT 8
>seq2929101
Length=1797
Score = 95.1 bits (104), Expect = 1e-14
Identities = 145/207 (70%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 38249 AATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAG 38308
|||||| || || || || |||||||| ||||| ||| | || ||| || ||| ||||
Sbjct 1148 AATATTGGTGAAGACCCTGACGGGCAAGACCATAACCCTTGAGGTCAAGTCCAGTGACAC 1089
Query 38309 CGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCG 38368
| | | | | |||| |||| || ||||| |||||||| || | ||||| ||||
Sbjct 1088 CATCGAGAATGTCAAAGTCAAAACCCAAGACAAGGAGGGAATCCCACCTGACCAGCAGCA 1029
Query 38369 GCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCA 38428
|| || | ||| ||||||||||| || | ||||| || || |||||||||||
Sbjct 1028 TCTGATATTTTCGGATAAACAGCTGGAGGATGGCCGCACTCTTTCAGATTACAACATCCA 969
Query 38429 AAAGGAAGCGACGCTGCATTTGGTGCT 38455
| || | || ||||| |||||||
Sbjct 968 GGAAGAGTCCACTCTGCACCTGGTGCT 942
>seq1627958
Length=3316
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || || || || || || || ||||| |||||||| | || |||||| |||
Sbjct 94 ATGCAGATCTTTGTGAAGACCCTGACTGGCAAGGCCATCACCCTTGAAGTCGAGCCCAGT 153
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | | | || | ||| |||| ||||| || || || ||| | || ||
Sbjct 154 GACACCATTGAGAATGTCAAGGCAAAGATCCAAGACAAGGAAGGCATCCCCCCTGATCAG 213
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||| || | || | || || ||||||||||| || | |||||| | |||||||||
Sbjct 214 CAGAGGTTGATCTTTGCCGGGAAACAGCTGGAAGATGGACGCACCGTGTCTGACTACAAC 273
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
||| | || || | || ||||| ||||| || | || || || ||
Sbjct 274 ATCTAGAAAGAGTCCACCCTGCACTTGGTCTTGTGCTTCAGGGGAGG 320
>seq1715087
Length=7196
Score = 93.3 bits (102), Expect = 4e-14
Identities = 107/144 (74%), Gaps = 0/144 (0%)
Strand=Plus/Minus
Query 38328 AAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAA 38387
|| |||| || ||||| || || ||| ||||||| ||| ||||||| | || |||||
Sbjct 7155 AAGATCCAGGATAAAGAAGGGATCCCCCCCGACCAGCAGAGGCTCATCTTTGCAGGCAAG 7096
Query 38388 CAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCAT 38447
|||||||| || | ||||| || |||||||||||||| || || | || |||||
Sbjct 7095 CAGCTGGAAGATGGTCGCACTCTTTCTGACTACAACATCCAGAAAGAGTCAACCCTGCAC 7036
Query 38448 TTGGTGCTGCGTTTGAGAGGCGGC 38471
|||| || ||| |||| || |||
Sbjct 7035 CTGGTTCTCCGTCTGAGGGGTGGC 7012
>seq1549142
Length=19220
Score = 89.7 bits (98), Expect = 5e-13
Identities = 147/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || || || || || || || ||||| ||||||||| | || |||||| ||
Sbjct 14561 ATGCAGATCTTTGTGAAGACCCTAACAGGCAAGACCATCACCCTTGAGGTCGAGCTCAGT 14502
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|| | | | | | | ||||| ||||||| |||| ||||| || || | ||||
Sbjct 14501 GATATCATTGAGAATGTCAAAGACAAAATCCAAAACAAGGAGGGCATCCCACCTGACCTG 14442
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||| | || || | ||||||||||||||||| || | | ||| || |||||| ||
Sbjct 14441 CAGTGTCTGATATTTGCGGGCAAACAGCTGGAAGATGGCCACACTCTTTTAGACTACGAC 14382
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCT 38455
| ||| || || | | ||||| |||||||
Sbjct 14381 ACCCAGAAAGAGTCCAGCCTGCACCTGGTGCT 14350
>seq2955825
Length=1785
Score = 86.0 bits (94), Expect = 6e-12
Identities = 136/191 (71%), Gaps = 3/191 (2%)
Strand=Plus/Plus
Query 38283 ACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAA 38341
||| | || ||| || ||| |||||| || | |||| | |||| ||||||| | |||
Sbjct 1 ACCCTTGAGGTCAAGCCCAGTGACAGCATGGAGAACG-TCAAAGCCAAAATCCAAGGCAA 59
Query 38342 AGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGA 38401
||||| || || | |||| ||||| || || | || |||||||||||||| || |
Sbjct 60 GGAGGGCATCCCACCTCACCAGCAGCGTCTAATATTTGCAGGCAAACAGCTGGAGGATGG 119
Query 38402 GCGCAC-CCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTT 38460
|||| | || |||||||||||||| || || | || |||| ||||||| |
Sbjct 120 CTGCACTCGTCTCAGACTACAACATCCAGAAAGAGTCCACCCTGCTGCTGGTGCTTCACC 179
Query 38461 TGAGAGGCGGC 38471
|| ||||||||
Sbjct 180 TGCGAGGCGGC 190
>seq1292660
Length=282
Score = 84.2 bits (92), Expect = 2e-11
Identities = 133/188 (71%), Gaps = 2/188 (1%)
Strand=Plus/Minus
Query 38271 GGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCG-TGCAAACGCTTAAAGAAAA 38329
||||| ||||||||| |||| ||| || ||| |||| | || || | | || | ||
Sbjct 281 GGCAAGACCATCACCCTCGAGGTCAAGCCCAGTGACACCACTGAGAATG-TCAAGGCCAA 223
Query 38330 AATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACA 38389
||| | | ||| ||||| || || ||||||||| | || || | || ||||||||
Sbjct 222 AATTCAAGCCAAGGAGGGCATCCCACTTGACCAACAGTGTCTGATATTTGCAGGCAAACA 163
Query 38390 GCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTT 38449
|||||| || | ||||| ||| |||| ||||||||| || || | | ||||| |
Sbjct 162 GCTGGAGGATGGCCGCACTCTCTCAGACTGCAACATCCAGAAAGAGTCCATCCTGCACCT 103
Query 38450 GGTGCTGC 38457
|| |||||
Sbjct 102 GGGGCTGC 95
>seq1615235
Length=3244
Score = 82.4 bits (90), Expect = 7e-11
Identities = 86/113 (76%), Gaps = 0/113 (0%)
Strand=Plus/Minus
Query 133396 ACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACATACTCCACATGTCCGAA 133455
||||||||| | |||||||| || ||||||||||| || ||||| ||| || ||
Sbjct 288 ACCTCCTCGGCCGTCCAAAAGGAAGCCTCGGCTTTCTTATACATTTGCCAAATATCATGG 229
Query 133456 TATTGTATGGGAAAAATCACAAACCGGCGGGGGTTTTCGCGCAACAGCGGCTC 133508
|||| || ||||| || ||||| ||| |||||||||| | || ||| || ||
Sbjct 228 TATTCGATAGGAAAGATGACAAAGCGGTGGGGGTTTTCTCTCAGCAGTGGTTC 176
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 479970164131200
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