Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Daubentonia_20madagascariensis_20[genbank_20GCA_5F000241425.1_202012
-01-05] 3,231,305 sequences; 2,855,365,987 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq2031399 145 2e-29
seq1799193 129 1e-24
seq1852988 123 5e-23
seq1731777 113 1e-19
seq1627958 113 1e-19
seq2929101 107 4e-18
seq3019692 104 5e-17
seq2677557 100 6e-16
seq1537392 98.7 2e-15
seq2955825 89.7 1e-12
seq1585181 89.7 1e-12
seq1531189 87.8 4e-12
seq2603436 84.2 5e-11
seq1798963 84.2 5e-11
seq1638757 84.2 5e-11
>seq2031399
Length=344
Score = 145 bits (160), Expect = 2e-29
Identities = 163/218 (75%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982
|||||||| ||||| |||||||||||||| |||||||| ||||| || | | ||| |
Sbjct 239 AGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGT 180
Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042
|||||||| || ||||| || || || || |||| ||| || || |||||||| |||||
Sbjct 179 CCATCTTCCAGTTGCTTGCCAGCAAAAATCAGTCTTTGCTGATCAGGAGGAATTCCTTCC 120
Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102
|| || || || || ||| || || || || || ||||| ||| || || || ||
Sbjct 119 TTATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCGACCTCGAGAGTG 60
Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
| ||||| ||||| | ||||||||||| | |||||
Sbjct 59 ATAGTCTTCCCTGTAAGGGTTTTTACGAAAATCTGCAT 22
>seq1799193
Length=4297
Score = 129 bits (142), Expect = 1e-24
Identities = 154/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982
|||||||| ||||| ||||||||||||| |||||||| ||||| || | | |||
Sbjct 2093 AGTCTCAACACAAGATGAAGAGTGGACTTCTTTTGAATGTTGTAGTCAGACAAAGTATGT 2034
Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042
|||||||| || ||||| | || || || |||| |||||| || |||||||| |||||
Sbjct 2033 CCATCTTCTAGTTGCTTGCAAGCAAAAATTAGTCTTTGTTGATCAGGAGGAATTCCTTCC 1974
Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102
|| || ||||| || ||| || || || | || ||||| ||| || ||||| ||
Sbjct 1973 TTATCCTGAATCTTGGCCTTTACATTTTCTCTTGTATCCGAGGGTTCAACCTCAAGAGTG 1914
Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAA 195131
| ||||| ||||| | |||||| |||
Sbjct 1913 ATGGTCTTCCCTGTAAGGATTTTTATGAA 1885
>seq1852988
Length=3013
Score = 123 bits (136), Expect = 5e-23
Identities = 171/238 (72%), Gaps = 10/238 (4%)
Strand=Plus/Minus
Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982
|||||||| ||||| |||||||||||| | |||||||| ||||| || | ||| |
Sbjct 2215 AGTCTCAACACAAGATGAAGAGTGGACGCCTTTTGAATGTTGTAGTC----AAAGTACAT 2160
Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042
|||| ||| || ||||| || || || || |||| ||| || || |||||||| |||||
Sbjct 2159 CCATTTTCCAGTTGCTTGCCAGCAAAAATCAGTCTTTGCTGATCAGGAGGAATTCCTTCC 2100
Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102
|| || || || || ||| || || || | || || || ||| || || || ||
Sbjct 2099 TTATCCTGGATCTTGGCCTTTACATTTTCTGTTGTATCTGAGGGTTCAACCTCGAGAGTG 2040
Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATTTATGGTTACTTGGTGGTTC 195160
| ||||| ||||| | ||||||||||| | ||||| | ||| |||||||||
Sbjct 2039 ATGGTCTTCCCTGTAAGGGTTTTTACGAAAATATGCATCT-TGG-----TGGTGGTTC 1988
>seq1731777
Length=2471
Score = 113 bits (124), Expect = 1e-19
Identities = 157/220 (71%), Gaps = 0/220 (0%)
Strand=Plus/Plus
Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982
|||||||| ||||| |||||||||||||| |||||||| ||||| || | | ||| |
Sbjct 711 AGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACAT 770
Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042
|| ||||| || ||||| || || || || |||| ||| || || ||| |||| |||||
Sbjct 771 CCGTCTTCCAGTTGCTTGCCAGCAAAAATCAGTCTTTGCTGATCAGGAAGAATTCCTTCC 830
Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102
| | || || || || || || | || |||||||| ||| || || || ||
Sbjct 831 TCATACTGGATCTTGGCTTTTACATTTTATATTGTGTCCGAGGGTTCAACCTCGAGAGTG 890
Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATTT 195142
| ||||| || | | |||||||| || | |||||||
Sbjct 891 ATGGTCTTCCCCATAAGGGTTTTTACAAAAATCTGCATTT 930
>seq1627958
Length=3316
Score = 113 bits (124), Expect = 1e-19
Identities = 160/224 (71%), Gaps = 6/224 (3%)
Strand=Plus/Minus
Query 194920 CTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTT 194979
|||| | ||| || | ||| || ||||||||||| | || ||||| || | | ||
Sbjct 314 CTGAAGCACAAGACCAAGTGCAGGGTGGACTCTTTCTAGATGTTGTAGTCAGACACGGTG 255
Query 194980 CTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCT 195039
| |||||||| ||||| || || || ||||| | | || || || || || ||||||
Sbjct 254 CGTCCATCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGATCAGGGGGGATGCCT 195
Query 195040 TCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTT---TCCACTTCA 195096
|| |||||||| || ||| |||||| |||||||||||||| ||| || ||||||
Sbjct 194 TCCTTGTCTTGGATCTTTGCCTTGACATTCTCAATGGTGTC---ACTGGGCTCGACTTCA 138
Query 195097 AGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
||||| | | ||| || |||| || || || || | |||||
Sbjct 137 AGGGTGATGGCCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 94
>seq2929101
Length=1797
Score = 107 bits (118), Expect = 4e-18
Identities = 146/202 (72%), Gaps = 4/202 (2%)
Strand=Plus/Plus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| ||||| ||||||||||||| || || |||||||| | |||||| | ||||| ||
Sbjct 945 ACCAGGTGCAGAGTGGACTCTTCCTGGATGTTGTAATCTGAAAGAGTGCGGCCATCCTCC 1004
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
||||| ||| | | || || || | || ||||| || || || || || ||||||||
Sbjct 1005 AGCTGTTTATCCGAAAATATCAGATGCTGCTGGTCAGGTGGGATTCCCTCCTTGTCTTGG 1064
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGT--CCGAACTTTCCACTTCAAGGGTAACCGTCT 195109
|||| ||||| ||||| ||||||| | | |||| || |||||||| | ||||
Sbjct 1065 GTTTTGACTTTGACATTCTCGATGGTGTCACTGGACTT--GACCTCAAGGGTTATGGTCT 1122
Query 195110 TTCCTGTCAAAGTTTTTACGAA 195131
| || |||| || || || ||
Sbjct 1123 TGCCCGTCAGGGTCTTCACCAA 1144
>seq3019692
Length=452
Score = 104 bits (114), Expect = 5e-17
Identities = 155/219 (71%), Gaps = 1/219 (0%)
Strand=Plus/Plus
Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982
|||||| | |||||||||||| ||||||| |||||||| ||||| || | ||| |
Sbjct 118 AGTCTCGACACAAGGTGAAGACTGGACTCCTTTTGAATGTTGTAGTCATACAAAGTACAT 177
Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042
|||||||| || ||||| || || || || | || ||| || || |||||||| |||||
Sbjct 178 CCATCTTCCAGTTGCTTGCCAGCAAAAATCACTCTTTGCTGATCAGGAGGAATTCCTTCC 237
Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102
|| || || || || ||| || || | || | || || ||| || | || ||
Sbjct 238 TTATCCTGGATCTTGGCCTTTACATTTTGTATTATATCTGAGGGTTCAACCTTGAGAGTG 297
Query 195103 ACCGTCTTT-CCTGTCAAAGTTTTTACGAACACTTGCAT 195140
| | |||| ||||| | | ||||||| || | |||||
Sbjct 298 ATGGCCTTTCCCTGTAAGAATTTTTACAAAAATCTGCAT 336
>seq2677557
Length=202
Score = 100 bits (110), Expect = 6e-16
Identities = 136/187 (73%), Gaps = 7/187 (4%)
Strand=Plus/Plus
Query 194957 GAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTC 195016
|||| ||||| |||| |||||| ||||| || ||| | || ||||| || || || |
Sbjct 6 GAATGTTGTAGTCGGAAAGAGTGTGGCCATCCTCCAGCCGTTTGCCTGCAAATATCAGAC 65
Query 195017 GTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGG 195076
|| ||||| || ||| |||| || |||||||| ||||| ||||||||||| ||||
Sbjct 66 ACTGCTGGTCGGGGGGA-TGCCCTCCTTGTCTTGGATTTTGGCTTTGACGTTCTCGATGG 124
Query 195077 TGTCCGAACT---TTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACA 195133
|||| ||| ||||| || ||||| | ||||| || |||| || || ||||| |
Sbjct 125 TGTC---ACTGGGCTCCACCTCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGA 181
Query 195134 CTTGCAT 195140
|||||
Sbjct 182 TCTGCAT 188
>seq1537392
Length=19804
Score = 98.7 bits (108), Expect = 2e-15
Identities = 144/204 (71%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
||| || ||||||||||| || || ||||| || | || || ||||||| | |||
Sbjct 12063 GTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGTGTCCATCTTTCACCTG 12004
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
|| || || ||||| | | || || || ||| | |||||||| |||||||| || ||
Sbjct 12003 TTTCCCAGCAAAGATCAAACTCTGCTGATCAGGAAGGATGCCTTCCTTGTCTTGGATCTT 11944
Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116
|| | |||| |||||||||||||| || || || ||||| | ||||| || ||
Sbjct 11943 TTCCATGACATTCTCAATGGTGTCATTGGGCTCTACCTCGAGGGTGATGGTCTTGCCGGT 11884
Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140
|| || || || || | |||||
Sbjct 11883 CAGGGTCTTCACAAAGATCTGCAT 11860
>seq2955825
Length=1785
Score = 89.7 bits (98), Expect = 1e-12
Identities = 105/141 (74%), Gaps = 1/141 (1%)
Strand=Plus/Minus
Query 194941 AGAGTGGACTCTTTTTGAATATTGTAATCGGCAA-GAGTTCTCCCATCTTCGAGCTGCTT 194999
|| ||||||||||| || || ||||| || | | |||| | ||||| || ||||| ||
Sbjct 162 AGGGTGGACTCTTTCTGGATGTTGTAGTCTGAGACGAGTGCAGCCATCCTCCAGCTGTTT 103
Query 195000 ACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTG 195059
||||| || || || || || |||| || || ||||| || ||| |||| |||||
Sbjct 102 GCCTGCAAATATTAGACGCTGCTGGTGAGGTGGGATGCCCTCCTTGCCTTGGATTTTGGC 43
Query 195060 CTTGACGTTCTCAATGGTGTC 195080
||||||||||| ||| ||||
Sbjct 42 TTTGACGTTCTCCATGCTGTC 22
>seq1585181
Length=9560
Score = 89.7 bits (98), Expect = 1e-12
Identities = 150/217 (69%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 194926 CTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCA 194985
||||| ||||| | ||||||||||||||| |||| ||||| || | |||| |||
Sbjct 3382 CTCAACACAAGATAAAGAGTGGACTCTTTCTGAACTTTGTAGTCAGATAGAGAATGTCCA 3441
Query 194986 TCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTG 195045
||||| || | || || || ||| | ||| ||| || || |||||||| |||| ||
Sbjct 3442 TCTTCTAGTTATTTGCCAGCAAAGGTCAGTTTTTGCTGATCAGGAGGAATTTCTTCCTTA 3501
Query 195046 TCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACC 195105
||||| || || ||| || || || | || ||| | ||| | | || || |
Sbjct 3502 TCTTGGATCTTGGCCTTTACATTGTCTTTTGTATCCAAGAGTTCAGCCTTGAGAGTGATG 3561
Query 195106 GTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATTT 195142
|| || ||||| | ||||||| ||| | |||||||
Sbjct 3562 GTTTTCCCTGTAAGGGTTTTTATGAAAATCTGCATTT 3598
>seq1531189
Length=23303
Score = 87.8 bits (96), Expect = 4e-12
Identities = 151/218 (69%), Gaps = 1/218 (0%)
Strand=Plus/Minus
Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982
|||||||| |||| || ||||||||||| |||||||| ||||| || | | ||| |
Sbjct 22454 AGTCTCAACACAAAATGGAGAGTGGACTCCTTTTGAATGTTGTAGTCAGAGAAAGTACAT 22395
Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042
|||||||| || | ||| || || || || |||| || || | | |||||| |||||
Sbjct 22394 CCATCTTCCAG-TTCTTGCCAGCAAAAATCAGTCTTTACTGATTGGTAGGAATTCCTTCC 22336
Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102
|| | | || | ||| || ||||| | || |||||| ||| || | || ||
Sbjct 22335 TTACCCTAGATCTCAGCCTTTACATTCTCTGTTGTATCCGAAGATTCAACGTTGAGAGTG 22276
Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
| |||| || || | | ||||||||| | |||||
Sbjct 22275 AGGATCTTCCCCGTAAGGGCTTTTACGAAAATATGCAT 22238
>seq2603436
Length=347
Score = 84.2 bits (92), Expect = 5e-11
Identities = 143/209 (68%), Gaps = 10/209 (5%)
Strand=Plus/Minus
Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982
|||||||| |||| | ||| || ||||| |||||||| ||||| || | ||||| |
Sbjct 217 AGTCTCAACCCAAGATAAAGGGTAGACTCCTTTTGAATGTTGTAGTCAGACAGAGTACGT 158
Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042
|||||||| || |||| || || | ||| ||| ||| || || |||||||| |||
Sbjct 157 CCATCTTCCAGTTGCTGGCCAGCAAGGATCCGTCTTTGCTGATCAGGAGGAATTCCT--- 101
Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102
| ||||| ||| || || || || ||||| || ||| || | |||||
Sbjct 100 -------GGATTTTGGCCTTTACCTTTTCTATTGTGTCTGAGGGTTCAACCTTGAGGGTG 48
Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAA 195131
||||| || | | |||||||||||
Sbjct 47 GTGGTCTTCCCCGGAAGGGTTTTTACGAA 19
>seq1798963
Length=3269
Score = 84.2 bits (92), Expect = 5e-11
Identities = 93/121 (77%), Gaps = 5/121 (4%)
Strand=Plus/Plus
Query 194925 TCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATC-GGCAAGAGTTCTCC 194983
|||||| | || ||||||||||||||||||||||| ||||| || ||||| ||| |
Sbjct 1633 TCTCAACATAAAATGAAGAGTGGACTCTTTTTGAATGTTGTAGTCAGGCAA-AGTATATC 1691
Query 194984 CATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTT 195043
||| || || ||||| || || ||||| |||| ||| || || |||| ||| |||||
Sbjct 1692 CATATTACAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGAAAT---TTCTT 1748
Query 195044 T 195044
|
Sbjct 1749 T 1749
>seq1638757
Length=5346
Score = 84.2 bits (92), Expect = 5e-11
Identities = 166/242 (69%), Gaps = 19/242 (8%)
Strand=Plus/Minus
Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT-TCT 194981
|||||| | ||||| |||||||||||||| |||||||| || || || | | ||| |||
Sbjct 1552 AGTCTCGACACAAGATGAAGAGTGGACTCCTTTTGAATGTTATAGTCAGACAAAGTGTCT 1493
Query 194982 CCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTC 195041
|||||| || | ||| || || ||||| ||| || |||||||| |||||
Sbjct 1492 -GGATCTTCCAGTTTCTTGCCAGCAAAGATCGGTC--------TCAGGAGGAATTCCTTC 1442
Query 195042 TTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGA---ACTTTCCACTTCAAG 195098
|| || ||||| | ||| || || || | || ||||| ||| ||||||||
Sbjct 1441 CTTATCCTGAATCTCGGCCTTTACATTTTCTTTTGTATCCGAGGGTGGTTCAACTTCAAG 1382
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATTTATGGTTACTTGGTGGT 195158
|| | | ||| ||||| | |||||| ||| | ||||| | ||| |||||||
Sbjct 1381 AGTGATAGCCTTCCCTGTAAGGATTTTTATGAAAATCTGCATCT-TGG-----TGGTGGT 1328
Query 195159 TC 195160
||
Sbjct 1327 TC 1326
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1063547846530935
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