Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Daubentonia_20madagascariensis_20[genbank_20GCA_5F000241425.1_202012
-01-05] 3,231,305 sequences; 2,855,365,987 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq1627958 120 2e-22
seq2677557 107 1e-18
seq1549142 95.1 8e-15
seq1537392 93.3 3e-14
seq2929101 86.0 4e-12
>seq1627958
Length=3316
Score = 120 bits (132), Expect = 2e-22
Identities = 165/229 (72%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814
|||||||| || | ||| |||||||| | ||| ||||||| ||||| ||||| ||
Sbjct 320 CCTCCCCTGAAGCACAAGACCAAGTGCAGGGTGGACTCTTTCTAGATGTTGTAGTCAGAC 261
Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874
| | | ||| |||| ||||||||||| |||||||| || | | ||||| || | ||
Sbjct 260 ACGGTGCGTCCATCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGATCAGGGGGG 201
Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAA 34932
| || |||||||| ||||| ||||| || || || | |||| || ||| |
Sbjct 200 ATGCCTTCCTTGTCTTGGATCTTTGCCTTGAC--ATTCTCAATGGTGTCACTGGGCTCGA 143
Query 34933 CATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
| || | ||| |||| || || || || ||||||||||||||||||||
Sbjct 142 CTTCAAGGGTGATGGCCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 94
>seq2677557
Length=202
Score = 107 bits (118), Expect = 1e-18
Identities = 138/189 (73%), Gaps = 1/189 (1%)
Strand=Plus/Plus
Query 34793 TTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATAT 34852
|||| ||||||| ||||| ||||| | | |||| |||||| |||| || ||||||||
Sbjct 1 TTTCCGAATGTTGTAGTCGGAAAGAGTGTGGCCATCCTCCAGCCGTTTGCCTGCAAATAT 60
Query 34853 TAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGC 34912
|| | |||||||| | || | ||||||||||| || || ||||||| |
Sbjct 61 CAGACACTGCTGGTCGGGGGG-ATGCCCTCCTTGTCTTGGATTTTGGCTTTGACGTTCTC 119
Query 34913 TATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAA 34972
|| | |||| || ||| || |||| ||| ||||| || || || || |||||||| ||
Sbjct 120 GATGGTGTCACTGGGCTCCACCTCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAA 179
Query 34973 GATCTGCAT 34981
|||||||||
Sbjct 180 GATCTGCAT 188
>seq1549142
Length=19220
Score = 95.1 bits (104), Expect = 8e-15
Identities = 139/193 (72%), Gaps = 4/193 (2%)
Strand=Plus/Plus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|||||||| ||| ||||| |||| | | |||| ||||||||||| || ||||||
Sbjct 14371 TCTTTCTGGGTGTCGTAGTCTAAAAGAGTGTGGCCATCTTCCAGCTGTTTGCCCGCAAAT 14430
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| || | ||| |||| | || | |||||||||| || || | |||||| ||
Sbjct 14431 ATCAGACACTGCAGGTCAGGTGGGATGCCCTCCTTGTTTTGGATTTTGTCTTTGAC--AT 14488
Query 34911 GCT-ATCGAT-TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCA 34968
|| | ||| |||| | ||| || || | ||| ||||| || || || || |||||||
Sbjct 14489 TCTCAATGATATCACTGAGCTCGACCTCAAGGGTGATGGTCTTGCCTGTTAGGGTCTTCA 14548
Query 34969 CAAAGATCTGCAT 34981
|||||||||||||
Sbjct 14549 CAAAGATCTGCAT 14561
>seq1537392
Length=19804
Score = 93.3 bits (102), Expect = 3e-14
Identities = 147/209 (70%), Gaps = 4/209 (2%)
Strand=Plus/Minus
Query 34775 CAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAG 34834
|||||| | ||| |||||||| ||||| ||||| || ||| | || |||| | ||
Sbjct 12066 CAAGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGTGTCCATCTTTCAC 12007
Query 34835 CTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAAT 34894
|||||| || ||||| || | | ||||| || | | | || |||||||| ||
Sbjct 12006 CTGTTTCCCAGCAAAGATCAAACTCTGCTGATCAGGAAGGATGCCTTCCTTGTCTTGGAT 11947
Query 34895 CTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952
||| | |||| || || || | ||| || ||| || |||| ||| ||||| ||
Sbjct 11946 CTTTTCCATGAC--ATTCTCAATGGTGTCATTGGGCTCTACCTCGAGGGTGATGGTCTTG 11889
Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
|| || || ||||||||||||||||||||
Sbjct 11888 CCGGTCAGGGTCTTCACAAAGATCTGCAT 11860
>seq2929101
Length=1797
Score = 86.0 bits (94), Expect = 4e-12
Identities = 143/205 (70%), Gaps = 4/205 (2%)
Strand=Plus/Plus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
|||| ||| | ||| |||| ||| ||||| || || ||||| | || |||| |||
Sbjct 945 ACCAGGTGCAGAGTGGACTCTTCCTGGATGTTGTAATCTGAAAGAGTGCGGCCATCCTCC 1004
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
|||||||| | | |||||| || | |||||||| | || | |||||||||||
Sbjct 1005 AGCTGTTTATCCGAAAATATCAGATGCTGCTGGTCAGGTGGGATTCCCTCCTTGTCTTGG 1064
Query 34893 ATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTT 34950
| || |||||| || || || | |||| || || || || | ||||||||| |
Sbjct 1065 GTTTTGACTTTGAC--ATTCTCGATGGTGTCACTGGACTTGACCTCAAGGGTTATGGTCT 1122
Query 34951 TTCCCGTGAGAGTCTTCACAAAGAT 34975
| ||||| || |||||||| || ||
Sbjct 1123 TGCCCGTCAGGGTCTTCACCAATAT 1147
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 311849032244040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |