Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daubentonia_20madagascariensis_20[genbank_20GCA_5F000241425.1_202012 -01-05] 3,231,305 sequences; 2,855,365,987 total letters Query= NC_016447.1 Length=219474 Score E Sequences producing significant alignments: (Bits) Value seq658838 96.9 5e-15 >seq658838 Length=215 Score = 96.9 bits (106), Expect = 5e-15 Identities = 111/149 (74%), Gaps = 3/149 (2%) Strand=Plus/Minus Query 197495 TGGATAAAAGCTACCAGGGTCGTGTCAACATTAGCCAAACCAACTACTCTTTGTGCATTA 197554 |||| ||||||||||||||||| | || | ||| | ||||| ||||||| | Sbjct 178 TGGACAAAAGCTACCAGGGTCGACTAAATACCAGCTGGAGT---TACTCCCTGTGCATCA 122 Query 197555 GGAACCTGACCGTGAATGATGCTGGTTCGTATAAGGCCCAAATTAACAAAAATAATTCCC 197614 | ||| ||||| |||| ||||| || | || || ||||| || ||| |||| ||||| | Sbjct 121 GCAACTTGACCCTGAAAGATGCAGGAACTTACAAAGCCCAGATAAACCAAAAGAATTCTC 62 Query 197615 AAGTCACCACCAAGGAGGAATTTACTCTG 197643 |||||||||| ||||| |||| || ||| Sbjct 61 AAGTCACCACTGAGGAGAAATTCACCCTG 33 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 673826472745200