Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daubentonia_20madagascariensis_20[genbank_20GCA_5F000241425.1_202012 -01-05] 3,231,305 sequences; 2,855,365,987 total letters Query= NC_017979.1 Length=43376 Score E Sequences producing significant alignments: (Bits) Value seq2336399 84.2 6e-12 >seq2336399 Length=1123 Score = 84.2 bits (92), Expect = 6e-12 Identities = 150/215 (70%), Gaps = 8/215 (4%) Strand=Plus/Plus Query 1017 ATTGATGTGGGTGCTGGTGTTATTGATCCAGACTTTAGGGGGAACGTTGGTGTTGTTTTA 1076 || ||||| | |||||||| || ||| ||| | ||| ||||| |||||||| || || Sbjct 32 ATAGATGTAGAAGCTGGTGTCATAGATGAAGAATGTAGAGGGAATGTTGGTGTCGTATTG 91 Query 1077 TTTAATTTTAGC---GATAAGCGTTTTCATATTTCAAGAGGTGATAGGATTGCTCAGTTA 1133 ||||||||| || || ||| ||| | || || |||||| |||||| ||| | Sbjct 92 TTTAATTTTGGCAAAGAAAAG---TTTGAAGTTAAAAACGGTGATCAGATTGCACAGCTC 148 Query 1134 ATTTGTGAAAAGGCTGTTTTTCC-ATCCATTCAAATAGTGGATTCCTTAGAGGATTCGGA 1192 ||||||||| || | |||| || | || || |||| | || || || | || Sbjct 149 ATTTGTGAACAGATTTTTTTACCCAGAAATAGAAGTAGTTCAAGTTTTGGATGACACTGA 208 Query 1193 AAGGGGTTCTGCAGGATTTGGGTCTAC-CGGAAGA 1226 ||||||||| | ||| ||||| || || |||||| Sbjct 209 AAGGGGTTCAGGAGGTTTTGGTTCCACTGGGAAGA 243 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133360144748580