Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Daubentonia_20madagascariensis_20[genbank_20GCA_5F000241425.1_202012
-01-05] 3,231,305 sequences; 2,855,365,987 total letters
Query= NC_017979.1
Length=43376
Score E
Sequences producing significant alignments: (Bits) Value
seq2336399 84.2 6e-12
>seq2336399
Length=1123
Score = 84.2 bits (92), Expect = 6e-12
Identities = 150/215 (70%), Gaps = 8/215 (4%)
Strand=Plus/Plus
Query 1017 ATTGATGTGGGTGCTGGTGTTATTGATCCAGACTTTAGGGGGAACGTTGGTGTTGTTTTA 1076
|| ||||| | |||||||| || ||| ||| | ||| ||||| |||||||| || ||
Sbjct 32 ATAGATGTAGAAGCTGGTGTCATAGATGAAGAATGTAGAGGGAATGTTGGTGTCGTATTG 91
Query 1077 TTTAATTTTAGC---GATAAGCGTTTTCATATTTCAAGAGGTGATAGGATTGCTCAGTTA 1133
||||||||| || || ||| ||| | || || |||||| |||||| ||| |
Sbjct 92 TTTAATTTTGGCAAAGAAAAG---TTTGAAGTTAAAAACGGTGATCAGATTGCACAGCTC 148
Query 1134 ATTTGTGAAAAGGCTGTTTTTCC-ATCCATTCAAATAGTGGATTCCTTAGAGGATTCGGA 1192
||||||||| || | |||| || | || || |||| | || || || | ||
Sbjct 149 ATTTGTGAACAGATTTTTTTACCCAGAAATAGAAGTAGTTCAAGTTTTGGATGACACTGA 208
Query 1193 AAGGGGTTCTGCAGGATTTGGGTCTAC-CGGAAGA 1226
||||||||| | ||| ||||| || || ||||||
Sbjct 209 AAGGGGTTCAGGAGGTTTTGGTTCCACTGGGAAGA 243
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 133360144748580
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |