Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Daubentonia_20madagascariensis_20[genbank_20GCA_5F000241425.1_202012
-01-05] 3,231,305 sequences; 2,855,365,987 total letters
Query= NC_018504.1
Length=123876
Score E
Sequences producing significant alignments: (Bits) Value
seq1731777 104 2e-17
seq2677557 82.4 6e-11
>seq1731777
Length=2471
Score = 104 bits (114), Expect = 2e-17
Identities = 150/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 101258 AAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCG 101317
|| || | |||||| || || || ||||| || ||||| || | | ||| | | ||
Sbjct 717 AACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACATCCGTCT 776
Query 101318 TCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCT 101377
|||| |||||| || ||||| |||| | || ||||| || |||| ||||| | ||
Sbjct 777 TCCAGTTGCTTGCCAGCAAAAATCAGTCTTTGCTGATCAGGAAGAATTCCTTCCTCATAC 836
Query 101378 TGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTT 101437
|| || || ||||||| ||| || ||||| || | ||| || || ||||||| ||
Sbjct 837 TGGATCTTGGCTTTTACATTTTATATTGTGTCCGAGGGTTCAACCTCGAGAGTGATGGTC 896
Query 101438 TTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|| || | | ||||||||||| ||||||||
Sbjct 897 TTCCCCATAAGGGTTTTTACAAAAATCTGCAT 928
>seq2677557
Length=202
Score = 82.4 bits (90), Expect = 6e-11
Identities = 128/182 (70%), Gaps = 1/182 (1%)
Strand=Plus/Plus
Query 101288 ATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGC 101347
|| ||||| |||| | ||| | |||| |||| | || ||||||||||||| || |
Sbjct 8 ATGTTGTAGTCGGAAAGAGTGTGGCCATCCTCCAGCCGTTTGCCTGCAAATATCAGACAC 67
Query 101348 TGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTG 101407
|| || ||||| || ||||| || || ||||| ||||| ||| || | || | |||
Sbjct 68 TGCTGGTCGGG-GGGATGCCCTCCTTGTCTTGGATTTTGGCTTTGACGTTCTCGATGGTG 126
Query 101408 TCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGC 101467
||| | ||||| || || |||| || ||||| || | || || || || ||||||
Sbjct 127 TCACTGGGCTCCACCTCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGC 186
Query 101468 AT 101469
||
Sbjct 187 AT 188
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 380672350425885
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |