Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Daubentonia_20madagascariensis_20[genbank_20GCA_5F000241425.1_202012
-01-05] 3,231,305 sequences; 2,855,365,987 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq1557410 96.9 6e-15
seq1725941 91.5 3e-13
>seq1557410
Length=8730
Score = 96.9 bits (106), Expect = 6e-15
Identities = 233/352 (66%), Gaps = 3/352 (1%)
Strand=Plus/Plus
Query 48024 GCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCTGCTTAA 48083
|||| |||| ||||||||||||| |||||| || || | | | || | || |
Sbjct 6728 GCAAGGCCTCAGTGAGAAACTCCTGTTCTATCCTAACAGCATTGCTAATTATTTCTTTTA 6787
Query 48084 CGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCAAAGTCCC 48143
| | |||| | ||||||| |||||| ||| | | || |||||||||||| |
Sbjct 6788 CTCTCTGCTCTAATGGTTTGTGTACCAGGTGTTTGA---ACATCAGGCAGGCAAAGTCAC 6844
Query 48144 TGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCC 48203
| || || || || | ||| | || | | ||| || ||| |||||||| | |
Sbjct 6845 AACGTAAACCCTCATCTCTGCTAGTAAGTTCATAGGAAAATGTGAGGCCAGGCATCAGTC 6904
Query 48204 CCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTG 48263
| | | || |||||||| || | || ||| | ||||| ||||||||||| |||||||
Sbjct 6905 CTCATTTCTTTAGCCAGAATATCGATGCAAAAAAACCAGAAAAGAAGATGCCTTCCACTG 6964
Query 48264 CCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCAGGAAAGCG 48323
| || || || | |||||| | | ||| | ||||| ||||| | | |
Sbjct 6965 CGGCAAAGGCTACAACATGTTCTCCGTAGGTAGCCTCTTTGTCCCCAATCCAACACAAGG 7024
Query 48324 CCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGAG 48375
||| || |||||| ||| || || |||||||| || ||||| ||||||
Sbjct 7025 TCCAATCCGCCTTCATCTAGACACAAGGCATCGTTTCAATGGCATTGAAGAG 7076
>seq1725941
Length=6718
Score = 91.5 bits (100), Expect = 3e-13
Identities = 89/112 (79%), Gaps = 2/112 (2%)
Strand=Plus/Plus
Query 213540 ATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCG 213599
|| || |||||||||||||||||| |||||| ||||||||||| ||| ||| || ||
Sbjct 1666 ATTTCTGTGCACAGGTTGCTGCATTTGATGGTTCCCAGGTTCTGCTGG-TTGCTCTTCCG 1724
Query 213600 TTGGCA-GAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGAC 213650
| || ||||| |||||||||||||| |||| || |||||| ||| |||
Sbjct 1725 ATTACAGGAATCTTTGTAGAGCATGTATGGGGTTCCTGTCTCTGTCTGAGAC 1776
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 893906967571200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |