Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Daubentonia_20madagascariensis_20[genbank_20GCA_5F000241425.1_202012
-01-05] 3,231,305 sequences; 2,855,365,987 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq1700391 84.2 4e-11
seq1615235 84.2 4e-11
>seq1700391
Length=5054
Score = 84.2 bits (92), Expect = 4e-11
Identities = 93/124 (75%), Gaps = 0/124 (0%)
Strand=Plus/Minus
Query 25883 TGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCT 25942
|||| |||||||||||||| || || || || ||| || || ||||| || || ||||
Sbjct 3362 TGGTCGCCTTTGCTGCTGTAGAAGGAATTTTCTTCTCGGGATCTTTTGCTGCTATATTCT 3303
Query 25943 GGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGG 26002
|||| ||| ||| || ||||| || || |||||||| || |||||||||||||
Sbjct 3302 GGCTAAAGAAGAGAGGTCTTATGCCTGGACTCACTTTTTCCAATGAACTCATCAGCAGGG 3243
Query 26003 ACGA 26006
| ||
Sbjct 3242 ATGA 3239
>seq1615235
Length=3244
Score = 84.2 bits (92), Expect = 4e-11
Identities = 95/125 (76%), Gaps = 2/125 (2%)
Strand=Plus/Plus
Query 25885 GTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGG 25944
|||||||||||||| ||||| |||||||| || ||||| ||||| | || ||||||
Sbjct 2990 GTAGCCTTTGCTGCAGTGGAAGGCATCTTCTTTTCTGGTTCTTTTGCATCAATATTCTGG 3049
Query 25945 CTCAAGCAGAAGGGGAC-CATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGA 26003
|||||| | | | |||| ||||| || || |||||||| || || || ||||| ||
Sbjct 3050 CTCAAG-AAACGAGGACTGATGCCTGGCCTCACATTTTCCAATGAACTTATTAGCAGAGA 3108
Query 26004 CGAGG 26008
||||
Sbjct 3109 TGAGG 3113
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 891327539419200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |