Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daubentonia_20madagascariensis_20[genbank_20GCA_5F000241425.1_202012 -01-05] 3,231,305 sequences; 2,855,365,987 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq1725941 84.2 1e-11 >seq1725941 Length=6718 Score = 84.2 bits (92), Expect = 1e-11 Identities = 98/130 (75%), Gaps = 2/130 (2%) Strand=Plus/Plus Query 25933 CATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTT 25992 ||| || | |||||||||||| | ||| | || | ||| || || | | |||||| || Sbjct 3055 CATGAAGAGATCTGGAATCCAAAGAGCAAAGAAAAGATCCCTGGCACGCTGTTCTTCCTT 3114 Query 25993 TCC-GTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAAT 26051 ||| ||| ||||| |||| ||| | ||| ||||| || ||||| ||||| || || | | Sbjct 3115 TCCTGTG-TTCTTCTTTAAATCAAGGAACTCAAAGATGTCTGAATGCCAAGGCTCCAGGT 3173 Query 26052 AGATAGCAAA 26061 |||||||||| Sbjct 3174 AGATAGCAAA 3183 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 243074897727875