Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Daubentonia_20madagascariensis_20[genbank_20GCA_5F000241425.1_202012
-01-05] 3,231,305 sequences; 2,855,365,987 total letters
Query= NC_021248.1
Length=307691
Score E
Sequences producing significant alignments: (Bits) Value
seq1799193 104 4e-17
seq1731777 98.7 2e-15
seq1585181 86.0 1e-11
>seq1799193
Length=4297
Score = 104 bits (114), Expect = 4e-17
Identities = 162/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCT-CTTTAGAGATATTATAATCAG 192367
||||| | ||| | || || | ||| | ||| | || |||| || || || || ||||
Sbjct 2103 ACCACGACGAAGTCTCAACACAAGATGAAGAGTGGACTTCTTTTGA-ATGTTGTAGTCAG 2045
Query 192368 ATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTG 192427
| || || || |||| || | ||| || | |||||| |||| ||| ||||||||||| |
Sbjct 2044 ACAAAGTATGTCCATCTTCTAGTTGCTTGCAAGCAAAAATTAGTCTTTGTTGATCAGGAG 1985
Query 192428 GTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTA 192487
| |||||||| ||||| || || || |||||||| | | | ||| || | ||| |
Sbjct 1984 GAATTCCTTCCTTATCCTGAATCTTGGCCTTTACATTTTCTCTTGTATCCGAGGGTTCAA 1925
Query 192488 CTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
| || ||||| ||||| || || || | |||| || || |||| |||
Sbjct 1924 CCTCAAGAGTGATGGTCTTCCCTGTAAGGATTTTTATGAAAATCTACAT 1876
>seq1731777
Length=2471
Score = 98.7 bits (108), Expect = 2e-15
Identities = 153/216 (71%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 192325 AATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATCAGATAATGTTCGTTCATC 192383
|| || | ||| | ||| | ||| ||| || || || || ||||| || || | | | ||
Sbjct 717 AACACAAGATGAAGAGTGGACTCCTTTTGA-ATGTTGTAGTCAGACAAAGTACATCCGTC 775
Query 192384 ATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATC 192443
|||| ||| || |||||||| || | ||| || |||||||| | |||||||| | ||
Sbjct 776 TTCCAGTTGCTTGCCAGCAAAAATCAGTCTTTGCTGATCAGGAAGAATTCCTTCCTCATA 835
Query 192444 TTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGT 192503
|| || || ||||||||| ||| | || || | ||| || || ||||| |||||
Sbjct 836 CTGGATCTTGGCTTTTACATTTTATATTGTGTCCGAGGGTTCAACCTCGAGAGTGATGGT 895
Query 192504 TTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539
|| || | | ||||| | ||| |||||||||||
Sbjct 896 CTTCCCCATAAGGGTTTTTACAAAAATCTGCATTTT 931
>seq1585181
Length=9560
Score = 86.0 bits (94), Expect = 1e-11
Identities = 128/182 (70%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 192358 TTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGT 192417
|| || ||||||| | || |||| || | || ||| ||||||||| | | | | ||
Sbjct 3418 TTGTAGTCAGATAGAGAATGTCCATCTTCTAGTTATTTGCCAGCAAAGGTCAGTTTTTGC 3477
Query 192418 TGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCT 192477
|||||||| || ||| |||| |||||||| || || |||||||| | | | |||
Sbjct 3478 TGATCAGGAGGAATTTCTTCCTTATCTTGGATCTTGGCCTTTACATTGTCTTTTGTATCC 3537
Query 192478 GACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537
| ||| | | ||||| |||||||| || || | ||||| || || |||||||||
Sbjct 3538 AAGAGTTCAGCCTTGAGAGTGATGGTTTTCCCTGTAAGGGTTTTTATGAAAATCTGCATT 3597
Query 192538 TT 192539
||
Sbjct 3598 TT 3599
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944718631417800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |