Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daubentonia_20madagascariensis_20[genbank_20GCA_5F000241425.1_202012 -01-05] 3,231,305 sequences; 2,855,365,987 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq1565340 100 8e-16 >seq1565340 Length=5001 Score = 100 bits (110), Expect = 8e-16 Identities = 162/233 (70%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 302607 ACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATG 302666 |||||| || ||| || |||||||| ||||| || || ||||||| ||||| ||||| Sbjct 1755 ACCAGTCTCAGCTGTCTTGACAGCTGTGTCAATGAGCCCCTCACGACCCCCCATGGCATG 1696 Query 302667 GAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGC 302726 |||||| | ||| ||| || || | | ||||| |||| || || ||||| Sbjct 1695 GAAGAAGAACTCGGTGGGTGTAAGGCCAGCCAGGTAGGAGTTCTCCACAAAGCCACGGCT 1636 Query 302727 CTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGG 302786 ||| ||| || || |||| | ||||| ||||| |||| || || | || |||| Sbjct 1635 CTCAGGCCCATAATCATCCTTGATGAAGTGAGGCAGAGTCCGGTGCTTGAATCCAAATGG 1576 Query 302787 GATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCTGCGAAA 302839 || ||||| || || ||||||||||| || | | | ||| | ||| |||| Sbjct 1575 AATTCGCTTGCCCTCCACGTTCTGCTGCCCAACGACAGCAATGACCTGGGAAA 1523 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1410882739259785