Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Daubentonia_20madagascariensis_20[genbank_20GCA_5F000241425.1_202012
-01-05] 3,231,305 sequences; 2,855,365,987 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq2560092 152 6e-31
seq1838203 140 4e-27
seq2819660 138 1e-26
seq1690259 134 2e-25
seq1790674 131 2e-24
seq1547184 131 2e-24
seq1712017 107 2e-17
seq2944646 95.1 1e-13
seq1748845 91.5 2e-12
seq1615235 87.8 2e-11
>seq2560092
Length=234
Score = 152 bits (168), Expect = 6e-31
Identities = 153/199 (77%), Gaps = 0/199 (0%)
Strand=Plus/Plus
Query 1254346 TGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCG 1254405
||||||| |||||| ||| | |||||||||||| |||||||||||||| | ||| |
Sbjct 34 TGGCCAGCTCGCCGGGCAGCAGCAGGCGCACGGCTGTCTGGATCTCGCGGGACGTGATGG 93
Query 1254406 TGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGT 1254465
|| ||||||||| | |||||||| ||| || || | ||||||| |||| ||||
Sbjct 94 TGGAGCGCTTGTTGTAATGCGCCAGGCGGGACGCTTCACCGGCGATGCGCTCGAAGATGT 153
Query 1254466 CGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCA 1254525
||||||| ||||||||||||| ||| | ||| |||||||| ||| ||||| |
Sbjct 154 CGTTGACGAACGAGTTCATGATGCCCATGGCCTTAGACGAGATGCCGGTGTCCGGGTGGA 213
Query 1254526 CCTGCTTGAGCACCTTGTA 1254544
||||||| |||||||||||
Sbjct 214 CCTGCTTCAGCACCTTGTA 232
>seq1838203
Length=1364
Score = 140 bits (154), Expect = 4e-27
Identities = 152/202 (75%), Gaps = 0/202 (0%)
Strand=Plus/Minus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| |||||| ||| | ||||||||| || |||||||||||||| | ||
Sbjct 1254 GCTTGGCCAGCTCGCCGGGCAGCAGCAGGCGCACTGCCGTCTGGATCTCGCGGGACGTGA 1195
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || ||||||||| | |||||||| ||| || ||| ||||||| |||| |
Sbjct 1194 TAGTAGAGCGCTTGTTGTAATGCGCCAGGCGGGACGCTTCGCCAGCGATGCGCTCGAAGA 1135
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
|||||||||| || || ||||||| ||| | |||| |||||||| ||| ||||
Sbjct 1134 TGTCGTTGACGAATGAATTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCCGGGT 1075
Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544
| |||||||| |||||||||||
Sbjct 1074 GGACCTGCTTCAGCACCTTGTA 1053
>seq2819660
Length=285
Score = 138 bits (152), Expect = 1e-26
Identities = 150/199 (75%), Gaps = 0/199 (0%)
Strand=Plus/Minus
Query 1254346 TGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCG 1254405
||||||| || ||| ||| | ||| |||||||| |||||||||||||| | ||| |
Sbjct 285 TGGCCAGCTCTCCGGGCAGCAGCAGACGCACGGCCGTCTGGATCTCGCGGGACGTGATAG 226
Query 1254406 TGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGT 1254465
|| ||||||||| | |||||||| ||| || ||| | ||||||| || | ||||
Sbjct 225 TGGAGCGCTTGTTGTAATGCGCCAGGCGGGATGCTTCGCCGGCGATGCGCTCAAAGATGT 166
Query 1254466 CGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCA 1254525
||||||||||||| ||||||| ||| | |||| || || || ||| ||||| |
Sbjct 165 CGTTGACAAACGAATTCATGATGCCCATGGCCTTGGACGAAATACCGGTGTCCGGGTGGA 106
Query 1254526 CCTGCTTGAGCACCTTGTA 1254544
||||||| |||||||||||
Sbjct 105 CCTGCTTCAGCACCTTGTA 87
>seq1690259
Length=2407
Score = 134 bits (148), Expect = 2e-25
Identities = 151/202 (75%), Gaps = 0/202 (0%)
Strand=Plus/Minus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || ||| ||| | ||| |||||||| ||||||||||| | | | ||
Sbjct 334 GCTTGGCCAGCTCTCCGGGCAGCAGCAGACGCACGGCCGTCTGGATCTCCCTGGAGGTGA 275
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || ||||||||| | |||||||| || ||||| ||||||| |||| |
Sbjct 274 TGGTCGAGCGCTTGTTGTAATGCGCCAGGCGAGACGCCTCCCCCGCGATGCGCTCGAAGA 215
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
|||||||||| || |||||||||| ||| | |||| |||||||| ||||||||
Sbjct 214 TGTCGTTGACGAAGGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGT 155
Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544
| |||||||| |||||||||||
Sbjct 154 GGACCTGCTTCAGCACCTTGTA 133
>seq1790674
Length=7858
Score = 131 bits (144), Expect = 2e-24
Identities = 150/202 (74%), Gaps = 0/202 (0%)
Strand=Plus/Plus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || ||| ||| | ||| |||||||| ||||||||||| | | | ||
Sbjct 5518 GCTTGGCCAGCTCTCCGGGCAGCAGCAGACGCACGGCCGTCTGGATCTCCCTGGAGGTGA 5577
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || ||||||||| | |||||||| || ||||| ||||||| |||| |
Sbjct 5578 TGGTCGAGCGCTTGTTGTAATGCGCCAGGCGAGAAGCCTCCCCCGCGATGCGCTCGAAAA 5637
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
|||||||||||||||||||||||| ||| | ||| |||||||| |||||| |
Sbjct 5638 TGTCGTTGACAAACGAGTTCATGATGCCCATGGCCTTAGACGAGATGCCGGTGTCGGGAT 5697
Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544
| |||||||| | |||||||||
Sbjct 5698 GGACCTGCTTCAACACCTTGTA 5719
>seq1547184
Length=13421
Score = 131 bits (144), Expect = 2e-24
Identities = 150/202 (74%), Gaps = 0/202 (0%)
Strand=Plus/Plus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| |||||||||| ||| ||| | |||||||||||| ||||||||||| | | | ||
Sbjct 8662 GCTTGGCCAGTTCTCCGGGCAACAGCAGGCGCACGGCCGTCTGGATCTCCCTGGAGGTGA 8721
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || ||||||||| | |||||||| || ||||| | ||||| |||| |
Sbjct 8722 TGGTCGAGCGCTTGTTGTAATGCGCCAGGCGAGAAGCCTCCCCCGCAATGCGCTCGAAAA 8781
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
|||||||||| ||||||||||||| ||| | |||| || ||||| ||||| |
Sbjct 8782 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGACGAAATGCCGGTATCGGGAT 8841
Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544
| |||||||| |||||||||||
Sbjct 8842 GAACCTGCTTCAGCACCTTGTA 8863
>seq1712017
Length=2298
Score = 107 bits (118), Expect = 2e-17
Identities = 143/199 (72%), Gaps = 0/199 (0%)
Strand=Plus/Minus
Query 1254346 TGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCG 1254405
||||||| || ||| ||| | ||| |||||||| ||||||||||| | | | ||| |
Sbjct 2298 TGGCCAGCTCTCCGGGCAGCAGCAGACGCACGGCCGTCTGGATCTCCCTGGAGGTGATGG 2239
Query 1254406 TGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGT 1254465
| ||||||||| | |||||||| || ||||| | ||||| || | || |
Sbjct 2238 TCGAGCGCTTGTTGTAATGCGCCAGGCGAGACGCCTCCCCCGCAATGCGCTCAAAGATAT 2179
Query 1254466 CGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCA 1254525
||||||| ||||||||||||| ||| | |||| || ||||| ||| || || |
Sbjct 2178 CGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGACGAAATGCCGGTGTCAGGATGGA 2119
Query 1254526 CCTGCTTGAGCACCTTGTA 1254544
||||||| || ||||||||
Sbjct 2118 CCTGCTTCAGTACCTTGTA 2100
>seq2944646
Length=1110
Score = 95.1 bits (104), Expect = 1e-13
Identities = 142/202 (70%), Gaps = 0/202 (0%)
Strand=Plus/Plus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || || | | | |||||||||||| ||||||||||| | | ||
Sbjct 381 GCTTGGCCAGCTCTCCAGGAAGCAGCAGGCGCACGGCCGTCTGGATCTCCCTGGAAGTGA 440
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || ||||||||| | ||||||| || ||||| | |||| || || | |
Sbjct 441 TAGTCGAGCGCTTGTTGTAATGCGCCAACCGAGAAGCCTCACCGGCGATACGCTCAAAAA 500
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
| |||||||| ||||| ||||| | ||| | ||| || || || ||||||||
Sbjct 501 TATCGTTGACGAACGAATTCATAATTCCCATGGCCTTAGACGAAATACCGGTGTCGGGGT 560
Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544
| |||||||| |||||||||||
Sbjct 561 GGACCTGCTTCAGCACCTTGTA 582
>seq1748845
Length=5337
Score = 91.5 bits (100), Expect = 2e-12
Identities = 86/110 (78%), Gaps = 0/110 (0%)
Strand=Plus/Minus
Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245
|| || |||||| | |||||||| | |||| ||| || |||||| |||| |||||
Sbjct 2491 GCTGCAAACTACTTAGACATCAAAGGTTTGCTTGATGTTACATGCAAGACTGTTGCCAAT 2432
Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAA 1592295
||||||||||| || | || |||||||| ||||||||||| || |||||
Sbjct 2431 ATGATCAAGGGGAAAACTCCTGAGGAGATTCGCAAGACCTTCAATATCAA 2382
>seq1615235
Length=3244
Score = 87.8 bits (96), Expect = 2e-11
Identities = 87/113 (77%), Gaps = 0/113 (0%)
Strand=Plus/Minus
Query 869831 ACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTGTACATCTCCCATACTTGCTGG 869890
||||||||||| ||||| | || |||||||| || || ||||| | ||| | | |||
Sbjct 288 ACCTCCTCGGCCGTCCAAAAGGAAGCCTCGGCTTTCTTATACATTTGCCAAATATCATGG 229
Query 869891 TAGCGGATAGGGAAGAGGACAAAGCGGTTGGGGTTGTCGCGCAACAGGGGTTC 869943
|| |||||| |||| ||||||||||| |||||| || | || ||| |||||
Sbjct 228 TATTCGATAGGAAAGATGACAAAGCGGTGGGGGTTTTCTCTCAGCAGTGGTTC 176
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 5841963179498685
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