Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Daubentonia_20madagascariensis_20[genbank_20GCA_5F000241425.1_202012
-01-05] 3,231,305 sequences; 2,855,365,987 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq1627958 132 3e-26
seq1549142 111 1e-19
seq1581579 105 4e-18
seq2677557 102 5e-17
seq1537392 102 5e-17
seq2929101 100 2e-16
seq2031399 91.5 9e-14
seq377944 87.8 1e-12
>seq1627958
Length=3316
Score = 132 bits (146), Expect = 3e-26
Identities = 168/229 (73%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810
|||||||| || | || ||||| ||| | |||| ||| |||| ||||| ||||| ||
Sbjct 320 CCTCCCCTGAAGCACAAGACCAAGTGCAGGGTGGACTCTTTCTAGATGTTGTAGTCAGAC 261
Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870
| | |||| |||| ||||| || || ||||| ||||||| | ||||| || | ||
Sbjct 260 ACGGTGCGTCCATCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGATCAGGGGGG 201
Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGA 34928
| || |||||||| | || ||| ||||| || || || | ||| ||| |||||
Sbjct 200 ATGCCTTCCTTGTCTTGGATCTTTGCCTTGAC--ATTCTCAATGGTGTCACTGGGCTCGA 143
Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
| |||| ||| |||| ||| || || |||||||| ||||||||||||||
Sbjct 142 CTTCAAGGGTGATGGCCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 94
>seq1549142
Length=19220
Score = 111 bits (122), Expect = 1e-19
Identities = 155/214 (72%), Gaps = 4/214 (2%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| |||||||| | | || ||| ||||| ||| ||||| | || || | ||||
Sbjct 14350 AGCACCAGGTGCAGGCTGGACTCTTTCTGGGTGTCGTAGTCTAAAAGAGTGTGGCCATCT 14409
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
||||| || || || || || ||||| | ||| |||| | || | ||||||||||
Sbjct 14410 TCCAGCTGTTTGCCCGCAAATATCAGACACTGCAGGTCAGGTGGGATGCCCTCCTTGTTT 14469
Query 34886 TTTATTTTTTGTTTGACGGATGCT-ATCGAT-TCATTGGCCTCGACATCAACGGTTATGG 34943
| ||||| | |||||| || || | ||| ||| || |||||| |||| ||| ||||
Sbjct 14470 TGGATTTTGTCTTTGAC--ATTCTCAATGATATCACTGAGCTCGACCTCAAGGGTGATGG 14527
Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|||| || || |||||||| ||||||||||||||
Sbjct 14528 TCTTGCCTGTTAGGGTCTTCACAAAGATCTGCAT 14561
>seq1581579
Length=3724
Score = 105 bits (116), Expect = 4e-18
Identities = 156/221 (71%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810
||||||||||| |||||||||||||| | |||| ||| ||||| ||||| ||||| ||
Sbjct 3026 CCTCCCCTCAAGCTCAGGACCAGGTGCAGGGTGAACTCTTTCTGGATGTTGTAGTCAGAC 2967
Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870
||| ||||| ||| ||||| | ||| | ||| ||||||| | ||||| || ||
Sbjct 2966 AGGGTGCGCCCATGTTCCAGCTACTTCCTGGCAAAGATCAACCCCTGCTGATCGGAAGGG 2907
Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930
| | |||||||| | || ||| ||||| | | | | ||| ||| ||| ||
Sbjct 2906 ATGTCTTCCTTGTCTTGGATCTTTGCCTTGACATTTCCAGTGGTGTCACTGGACTCAACC 2847
Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGAT 34971
| | ||| ||| |||| || || | |||||| | |||||
Sbjct 2846 TTGAGGGTGATGATCTTGCCAGTCAAGGTCTTCAGGAAGAT 2806
>seq2677557
Length=202
Score = 102 bits (112), Expect = 5e-17
Identities = 136/188 (72%), Gaps = 1/188 (1%)
Strand=Plus/Plus
Query 34790 TTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATC 34849
||| ||||||| ||||| || || || | |||| ||||| | || || || || |||
Sbjct 2 TTCCGAATGTTGTAGTCGGAAAGAGTGTGGCCATCCTCCAGCCGTTTGCCTGCAAATATC 61
Query 34850 AGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT 34909
|| | |||||||| | || | ||||||||||| | ||||| ||||||| |
Sbjct 62 AGACACTGCTGGTCGGGGGG-ATGCCCTCCTTGTCTTGGATTTTGGCTTTGACGTTCTCG 120
Query 34910 ATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAG 34969
|| | ||| ||| ||| || || | ||| |||||||| || || |||||||| || |||
Sbjct 121 ATGGTGTCACTGGGCTCCACCTCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAG 180
Query 34970 ATCTGCAT 34977
||||||||
Sbjct 181 ATCTGCAT 188
>seq1537392
Length=19804
Score = 102 bits (112), Expect = 5e-17
Identities = 149/209 (71%), Gaps = 4/209 (2%)
Strand=Plus/Minus
Query 34771 CAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAG 34830
|| ||| | |||| ||| ||||| ||||| ||||| || ||| || | |||| | ||
Sbjct 12066 CAAGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGTGTCCATCTTTCAC 12007
Query 34831 TTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTAT 34890
|| || || || ||||||| | ||||| || | | | || |||||||| | ||
Sbjct 12006 CTGTTTCCCAGCAAAGATCAAACTCTGCTGATCAGGAAGGATGCCTTCCTTGTCTTGGAT 11947
Query 34891 TTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTT 34948
|||| |||| || || || | ||||||| ||| || || | ||| ||||||||
Sbjct 11946 CTTTTCCATGAC--ATTCTCAATGGTGTCATTGGGCTCTACCTCGAGGGTGATGGTCTTG 11889
Query 34949 CCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| || |||||||| ||||||||||||||
Sbjct 11888 CCGGTCAGGGTCTTCACAAAGATCTGCAT 11860
>seq2929101
Length=1797
Score = 100 bits (110), Expect = 2e-16
Identities = 148/208 (71%), Gaps = 4/208 (2%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| |||||||| | ||| ||| | ||| ||||| || || || || |||| ||||
Sbjct 942 AGCACCAGGTGCAGAGTGGACTCTTCCTGGATGTTGTAATCTGAAAGAGTGCGGCCATCC 1001
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
||||| || || | | || ||||| | |||||||| | || | |||||||||||
Sbjct 1002 TCCAGCTGTTTATCCGAAAATATCAGATGCTGCTGGTCAGGTGGGATTCCCTCCTTGTCT 1061
Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943
| |||| |||||| || || || | ||| ||| || ||| |||| ||||||||
Sbjct 1062 TGGGTTTTGACTTTGAC--ATTCTCGATGGTGTCACTGGACTTGACCTCAAGGGTTATGG 1119
Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGAT 34971
|||| ||||| |||||||| || || ||
Sbjct 1120 TCTTGCCCGTCAGGGTCTTCACCAATAT 1147
>seq2031399
Length=344
Score = 91.5 bits (100), Expect = 9e-14
Identities = 154/223 (69%), Gaps = 0/223 (0%)
Strand=Plus/Minus
Query 34763 CTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCA 34822
|||| || || |||| ||| |||||| |||||||| ||||| || | | || ||
Sbjct 236 CTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGTCCA 177
Query 34823 TCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34882
|| ||||||||||| || || || ||||||| |||||| || | || | || |||||
Sbjct 176 TCTTCCAGTTGCTTGCCAGCAAAAATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTA 117
Query 34883 TCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATG 34942
|| | || || || || | |||| | || || ||||| || | || ||
Sbjct 116 TCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCGACCTCGAGAGTGATA 57
Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATGATAGTGG 34985
||||| || || ||||| ||||| || |||||||| | ||||
Sbjct 56 GTCTTCCCTGTAAGGGTTTTTACGAAAATCTGCATCTTGGTGG 14
>seq377944
Length=2484
Score = 87.8 bits (96), Expect = 1e-12
Identities = 84/106 (79%), Gaps = 4/106 (4%)
Strand=Plus/Plus
Query 34874 CCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACAT 34931
||||||||||| | ||||| |||||| || || || | ||| ||| |||||| |
Sbjct 1701 CCCTCCTTGTCTTGGATTTTGGCTTTGAC--ATTCTCGATGGTGTCACTGGGCTCGACCT 1758
Query 34932 CAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
||| ||| |||||||| ||||| |||||||| ||||||||||||||
Sbjct 1759 CAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 1804
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 312866519327795
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |