Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daubentonia_20madagascariensis_20[genbank_20GCA_5F000241425.1_202012 -01-05] 3,231,305 sequences; 2,855,365,987 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq2031399 82.4 6e-11 >seq2031399 Length=344 Score = 82.4 bits (90), Expect = 6e-11 Identities = 165/242 (68%), Gaps = 2/242 (1%) Strand=Plus/Plus Query 107553 AAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAA-CGGAGGC 107611 || ||||| ||||| || ||||| | ||||| || || || || |||| || | | Sbjct 19 AAGATGCAGATTTTCGTAAAAACCCTTACAGGGAAGACTATCACTCTCGAGGTCGAACCC 78 Query 107612 TGGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGA 107671 | | ||||| | | | ||||| ||||| ||||| ||||| | || || Sbjct 79 TCG-GATACAATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGA 137 Query 107672 TCAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTA 107731 |||||| ||||| |||| ||| || || || ||||| || | || || | ||||| Sbjct 138 TCAGCAAAGACTGATTTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTA 197 Query 107732 CAACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAAATAATAA 107791 |||||||||||||||||| || | || | ||||||||| | || || || ||| || Sbjct 198 CAACATTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAGACTTCGTGGTGGTGCTAAGAA 257 Query 107792 AA 107793 || Sbjct 258 AA 259 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 383168421459145