Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Daubentonia_20madagascariensis_20[genbank_20GCA_5F000241425.1_202012
-01-05] 3,231,305 sequences; 2,855,365,987 total letters
Query= NC_024696.1
Length=180800
Score E
Sequences producing significant alignments: (Bits) Value
seq1536785 233 2e-56
>seq1536785
Length=19290
Score = 233 bits (258), Expect = 2e-56
Identities = 245/322 (76%), Gaps = 0/322 (0%)
Strand=Plus/Plus
Query 171771 CATAGAGTGTCAGACAGGTCTTACCCGATATTTTTCCGGACCCAAAAGTATTAAACAAAC 171830
||||||| || || |||| | || || || || || || ||||| |||||||| | ||
Sbjct 10553 CATAGAGGGTGAGGCAGGCTGTTCCTGAGATCTTCCCAGAACCAAAGGTATTAAAGAGAC 10612
Query 171831 ACATAAAACAGCCTTCGTCCTCCACGGTGGTGTTCCAAAAAGTCAATGTAGAATTTCTGA 171890
|||| |||| ||||| || |||| |||||| ||||| || || | || || ||| ||
Sbjct 10613 ACATGTAACACCCTTCATCTTCCAGGGTGGTATTCCAGAAGGTGATAGTTGAGTTTTGGA 10672
Query 171891 GTCCGAGTTGCGTAATGTTCACCCGGTCCTTGTACGGAGGCTGGACGACAACACCGTGAT 171950
|||| || || || ||||| | || |||||| || | ||||||||| ||||| || ||
Sbjct 10673 GTCCCAGCTGGGTGATGTTTATCCTGTCCTTATAGGCAGGCTGGACTACAACCCCATGGC 10732
Query 171951 TCTCGCTGAACGTGGCCATGTTTTCGGGGCTCGTAGCCTTTATCTTCTGCCACGTTACTA 172010
|||||||||| ||| |||||||||| ||||| |||||| | ||||||||||| || |
Sbjct 10733 TCTCGCTGAAGGTGACCATGTTTTCTGGGCTTACAGCCTTCTTTTTCTGCCACGTCACAA 10792
Query 172011 TTAAAACTTCTTTGTCGGTTTGAAGAGAGCATCTTAAAGAAGCAGGTGTGTTCAATAATT 172070
| || || || | | ||||| |||||||||||||| |||||||||||||||| | |
Sbjct 10793 TCAAGACATCCTGGGAAGTTTGCAGAGAGCATCTTAAGGAAGCAGGTGTGTTCAGTTTCT 10852
Query 172071 CCCTTTCGTCTTGCGTTACCAC 172092
| ||||| || || || |||||
Sbjct 10853 CTCTTTCATCCTGGGTCACCAC 10874
Score = 143 bits (158), Expect = 3e-29
Identities = 168/224 (75%), Gaps = 5/224 (2%)
Strand=Plus/Plus
Query 171503 ACAGTTTGTCTGATGTCTGTTACAGTCCCCAAGTGTAAGACTTTGCATATCACCTCCTCG 171562
|||||||| |||| || || |||||||||| ||| | || | ||| ||||||||||
Sbjct 7980 ACAGTTTGCCTGAAGTAGGTCACAGTCCCCAGGTGCAGTACCTGGCAGATCACCTCCT-- 8037
Query 171563 TTTCCCACTTGACTTTTAGGATCTTTTACTTGAAGAATGCTAGTAACAGATGTAGTCCCG 171622
| ||||| ||||| || || ||||| || ||||| ||||| ||||||||||| |||||
Sbjct 8038 -TCCCCACCTGACTCTTGGGGTCTTTGACCTGAAGGATGCTGGTAACAGATGTGGTCCCA 8096
Query 171623 TTACGATGTAGA-ACGGTTTTAGTACTATTTTCTATTCCGGATCCGGCAACTTTCCAAAA 171681
|| | || ||| | | | |||||||||||| || || ||||| || ||||| |
Sbjct 8097 TTCGGGTG-AGACAGAATCTCAGTACTATTTTCAATCCCTGATCCACGGACCTTCCAGGA 8155
Query 171682 TATAACAGGAGCTGGTCTAGCAGTAGCAGAGCAAGTTATGTTTA 171725
|| || || ||||| | ||||| ||||||||||| || ||||
Sbjct 8156 GATCACGGGGGCTGGGCGGGCAGTGGCAGAGCAAGTGATATTTA 8199
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 555068372328000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |