Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Daubentonia_20madagascariensis_20[genbank_20GCA_5F000241425.1_202012
-01-05] 3,231,305 sequences; 2,855,365,987 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq2031399 132 1e-25
seq1799193 111 4e-19
seq3019692 96.9 8e-15
seq1983535 86.0 1e-11
seq1715087 84.2 5e-11
>seq2031399
Length=344
Score = 132 bits (146), Expect = 1e-25
Identities = 153/206 (74%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
||||| || ||||| || || |||||| | || || ||| || || ||| | |||
Sbjct 37 AAAACCCTTACAGGGAAGACTATCACTCTCGAGGTCGAACCCTCGGATACAATAGAAAAT 96
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|||||| ||||| || || || ||||||||| || || |||||||| || ||
Sbjct 97 GTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCAGCAAAGACTGATTTTT 156
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|| || ||||| ||||||||||| | |||||| | || |||||| | || || |||||
Sbjct 157 GCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTACAACATTCAAAAGGAGTCC 216
Query 206365 ACTCTTCACCTTGTTTTGAGACTTCG 206390
|||||||| ||||| |||||||||||
Sbjct 217 ACTCTTCATCTTGTGTTGAGACTTCG 242
Score = 95.1 bits (104), Expect = 3e-14
Identities = 84/105 (80%), Gaps = 0/105 (0%)
Strand=Plus/Minus
Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811
||||||||||| ||||| |||||||| ||||| || || | || ||||||| ||||||
Sbjct 242 CGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTA 183
Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856
| |||||||||||| ||||| || || || || || | ||| |||
Sbjct 182 CGTCCATCTTCCAGTTGCTTGCCAGCAAAAATCAGTCTTTGCTGA 138
>seq1799193
Length=4297
Score = 111 bits (122), Expect = 4e-19
Identities = 148/206 (72%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|||| || ||||| || || |||||| | || || ||| || || ||| |||
Sbjct 1891 AAAATCCTTACAGGGAAGACCATCACTCTTGAGGTTGAACCCTCGGATACAAGAGAAAAT 1950
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|||||| |||||||| || || ||||||||| || || |||||||| || ||
Sbjct 1951 GTAAAGGCCAAGATTCAGGATAAGGAAGGAATTCCTCCTGATCAACAAAGACTAATTTTT 2010
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|| | ||||| | ||||||||| |||||| | || |||||| | || || ||||
Sbjct 2011 GCTTGCAAGCAACTAGAAGATGGACATACTTTGTCTGACTACAACATTCAAAAGAAGTCC 2070
Query 206365 ACTCTTCACCTTGTTTTGAGACTTCG 206390
|||||||| ||||| |||||||||||
Sbjct 2071 ACTCTTCATCTTGTGTTGAGACTTCG 2096
>seq3019692
Length=452
Score = 96.9 bits (106), Expect = 8e-15
Identities = 153/218 (70%), Gaps = 1/218 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAA-CGATCACTTTGGAAGTGGAAAGTTCTGA 206231
||||| ||| |||| || ||||| ||| | |||||| | | || ||| || ||
Sbjct 333 CAGATTTTTGTAAAAATTCTTACAGGGAAAGGCCATCACTCTCAAGGTTGAACCCTCAGA 274
Query 206232 CACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291
| | | || |||||| ||||| || || || ||||||||| || || ||
Sbjct 273 TATAATACAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCAGCA 214
Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351
|||| | || || || || ||||| ||||||||||| | |||||| || |||||| |
Sbjct 213 AAGAGTGATTTTTGCTGGCAAGCAACTGGAAGATGGATGTACTTTGTATGACTACAACAT 154
Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTC 206389
|| || ||||| | |||||||||||| | ||||||||
Sbjct 153 TCAAAAGGAGTCCAGTCTTCACCTTGTGTCGAGACTTC 116
>seq1983535
Length=492
Score = 86.0 bits (94), Expect = 1e-11
Identities = 108/147 (73%), Gaps = 6/147 (4%)
Strand=Plus/Plus
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|||||| ||||| || || || ||||||||| || || |||||||| || ||
Sbjct 87 GTAAAGGCTAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCAGCAAAGACTAATTTTT 146
Query 206305 --GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGT 206362
|| || ||||| ||||||||||| | ||||| || |||||| | || || ||||
Sbjct 147 TTGCTGGTAAGCAACTGGAAGATGGATGTACTTT----GACTACAACATTCAAAAGGAGT 202
Query 206363 CTACTCTTCACCTTGTTTTGAGACTTC 206389
|||||||| ||||| ||||||||||
Sbjct 203 GCACTCTTCATCTTGTGTTGAGACTTC 229
>seq1715087
Length=7196
Score = 84.2 bits (92), Expect = 5e-11
Identities = 94/126 (75%), Gaps = 0/126 (0%)
Strand=Plus/Minus
Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313
||||| || || |||||||| || || ||| || || || ||||| || || |||
Sbjct 7155 AAGATCCAGGATAAAGAAGGGATCCCCCCCGACCAGCAGAGGCTCATCTTTGCAGGCAAG 7096
Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373
||| |||||||||| | ||| | | || |||||| ||||||||||||| || || |||
Sbjct 7095 CAGCTGGAAGATGGTCGCACTCTTTCTGACTACAACATCCAGAAAGAGTCAACCCTGCAC 7036
Query 206374 CTTGTT 206379
|| |||
Sbjct 7035 CTGGTT 7030
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1132892124416905
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |