Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Daubentonia_20madagascariensis_20[genbank_20GCA_5F000241425.1_202012
-01-05] 3,231,305 sequences; 2,855,365,987 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq1725941 89.7 5e-13
seq1627958 87.8 2e-12
seq2031399 84.2 2e-11
>seq1725941
Length=6718
Score = 89.7 bits (98), Expect = 5e-13
Identities = 75/92 (82%), Gaps = 0/92 (0%)
Strand=Plus/Plus
Query 147511 ACGATTTCGGCGCACAGGTTGCTGCATTTTATGACTCCCAAATTTTGCTGATTGCTTTTC 147570
|| ||||| | |||||||||||||||||| ||| ||||| || ||||| ||||| |||
Sbjct 1663 ACTATTTCTGTGCACAGGTTGCTGCATTTGATGGTTCCCAGGTTCTGCTGGTTGCTCTTC 1722
Query 147571 CGATTGCACGCGTCTTTGAAGAGCATGTACGG 147602
||||| || | |||||| |||||||||| ||
Sbjct 1723 CGATTACAGGAATCTTTGTAGAGCATGTATGG 1754
>seq1627958
Length=3316
Score = 87.8 bits (96), Expect = 2e-12
Identities = 150/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 131906 AAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGC 131965
|||| ||| ||||| || | | | |||||||| | ||||||||||| || ||| ||
Sbjct 311 AAGCACAAGACCAAGTGCAGGGTGGACTCTTTCTAGATGTTGTAGTCAGACACGGTGCGT 252
Query 131966 GAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCT 132025
|||||| |||||||| |||| | |||| | | ||| ||||| || || ||||||||
Sbjct 251 CCATCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGATCAGGGGGGATGCCTTCC 192
Query 132026 TTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTC 132085
|| || || ||| || | | || | || || | ||||| ||||| | ||
Sbjct 191 TTGTCTTGGATCTTTGCCTTGACATTCTCAATGGTGTCACTGGGCTCGACTTCAAGGGTG 132
Query 132086 AGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
| | || |||||||| || || | || ||||||||
Sbjct 131 ATGGCCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 94
>seq2031399
Length=344
Score = 84.2 bits (92), Expect = 2e-11
Identities = 135/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989
||||| ||||||||||||||||| || ||||| |||||| || || || || | |
Sbjct 215 GACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGTCCATCTTCCAGTTGCTTGCCAGCA 156
Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049
| || || | || ||||| ||||| || ||||| ||||| || || || |
Sbjct 155 AAAATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATCTTGGCCTTTACA 96
Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109
| ||| | ||||| | || || || |||| || | || || || || || ||||||
Sbjct 95 TTTTCTATTGTATCCGAGGGTTCGACCTCGAGAGTGATAGTCTTCCCTGTAAGGGTTTTT 36
Query 132110 ATGAAAATCTGCAT 132123
| ||||||||||||
Sbjct 35 ACGAAAATCTGCAT 22
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 457360248079800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |