Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Daubentonia_20madagascariensis_20[genbank_20GCA_5F000241425.1_202012
-01-05] 3,231,305 sequences; 2,855,365,987 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq1690259 161 1e-33
seq2560092 158 2e-32
seq1838203 158 2e-32
seq1547184 158 2e-32
seq1790674 149 9e-30
seq2819660 127 3e-23
seq1888768 114 2e-19
seq2944646 113 6e-19
seq1899669 109 8e-18
seq2060647 105 9e-17
seq1712017 100 4e-15
seq1653393 91.5 2e-12
seq1615235 86.0 9e-11
>seq1690259
Length=2407
Score = 161 bits (178), Expect = 1e-33
Identities = 174/229 (76%), Gaps = 6/229 (3%)
Strand=Plus/Plus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| |||||||| |||||| |||| |||| || |||| |||||
Sbjct 133 TACAAGGTGCTGAAGCAGGTCCACCCCGACACCGG-----CATC-TCGTCCAAGGCCATG 186
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
||||||||||| || ||||||||||| |||| ||||||| ||||| ||||
Sbjct 187 GGCATCATGAACTCCTTCGTCAACGACATCTTCGAGCGCATCGCGGGGGAGGCGTCTCGC 246
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| | |||||||||| || ||| | | | ||||||||||| ||||||||
Sbjct 247 CTGGCGCATTACAACAAGCGCTCGACCATCACCTCCAGGGAGATCCAGACGGCCGTGCGT 306
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| ||| || ||||||| ||||||||| |||||||||||||
Sbjct 307 CTGCTGCTGCCCGGAGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 355
>seq2560092
Length=234
Score = 158 bits (174), Expect = 2e-32
Identities = 173/229 (76%), Gaps = 6/229 (3%)
Strand=Plus/Minus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| |||||||| ||||| |||| |||| || ||| |||||
Sbjct 232 TACAAGGTGCTGAAGCAGGTCCACCCGGACACCGG-----CATC-TCGTCTAAGGCCATG 179
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
|||||||||||||| ||||||||||| |||| ||||||| | || || |||
Sbjct 178 GGCATCATGAACTCGTTCGTCAACGACATCTTCGAGCGCATCGCCGGTGAAGCGTCCCGC 119
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| | |||||||||| ||| ||| | |||||||||||||| |||||||||
Sbjct 118 CTGGCGCATTACAACAAGCGCTCCACCATCACGTCCCGCGAGATCCAGACAGCCGTGCGC 59
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| |||||| ||||||| || ||||| || ||||||||||
Sbjct 58 CTGCTGCTGCCCGGCGAGCTGGCCAAACATGCCGTGTCGGAGGGCACCA 10
>seq1838203
Length=1364
Score = 158 bits (174), Expect = 2e-32
Identities = 173/229 (76%), Gaps = 6/229 (3%)
Strand=Plus/Plus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| |||||||| ||||| |||| |||| || |||| |||||
Sbjct 1053 TACAAGGTGCTGAAGCAGGTCCACCCGGACACCGG-----CATC-TCGTCCAAGGCCATG 1106
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
|||||||| || || ||||||||||| |||| ||||||| ||| || |||
Sbjct 1107 GGCATCATGAATTCATTCGTCAACGACATCTTCGAGCGCATCGCTGGCGAAGCGTCCCGC 1166
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| | |||||||||| || ||| | |||||||||||||| || ||||||
Sbjct 1167 CTGGCGCATTACAACAAGCGCTCTACTATCACGTCCCGCGAGATCCAGACGGCAGTGCGC 1226
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| |||||| ||||||| ||||||||| |||||||||||||
Sbjct 1227 CTGCTGCTGCCCGGCGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 1275
>seq1547184
Length=13421
Score = 158 bits (174), Expect = 2e-32
Identities = 172/227 (76%), Gaps = 6/227 (3%)
Strand=Plus/Minus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| |||||||| || ||| |||| ||| || |||| |||||
Sbjct 8863 TACAAGGTGCTGAAGCAGGTTCATCCCGATACCGG-----CATT-TCGTCCAAGGCCATG 8810
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
|||||||||||||| ||||||||||| |||| ||||| | ||||| ||||
Sbjct 8809 GGCATCATGAACTCGTTCGTCAACGACATTTTCGAGCGCATTGCGGGGGAGGCTTCTCGC 8750
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| | |||||||||| || ||| | | | ||||||||||| |||||||||
Sbjct 8749 CTGGCGCATTACAACAAGCGCTCGACCATCACCTCCAGGGAGATCCAGACGGCCGTGCGC 8690
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140
||| | ||| ||| |||||||||| ||||||||| |||||||||||
Sbjct 8689 CTGCTGTTGCCCGGAGAACTGGCCAAGCACGCCGTGTCCGAGGGCAC 8643
>seq1790674
Length=7858
Score = 149 bits (164), Expect = 9e-30
Identities = 171/229 (75%), Gaps = 6/229 (3%)
Strand=Plus/Minus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||| | |||||||| || ||| |||| |||| || ||| |||||
Sbjct 5719 TACAAGGTGTTGAAGCAGGTCCATCCCGACACCGG-----CATC-TCGTCTAAGGCCATG 5666
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
|||||||||||||||||||||||||| |||| ||||||| ||||| ||||
Sbjct 5665 GGCATCATGAACTCGTTTGTCAACGACATTTTCGAGCGCATCGCGGGGGAGGCTTCTCGC 5606
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| | |||||||||| || ||| | | | ||||||||||| ||||||||
Sbjct 5605 CTGGCGCATTACAACAAGCGCTCGACCATCACCTCCAGGGAGATCCAGACGGCCGTGCGT 5546
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| ||| || ||||||| |||||| || || ||||||||||
Sbjct 5545 CTGCTGCTGCCCGGAGAGCTGGCCAAGCACGCTGTGTCGGAGGGCACCA 5497
>seq2819660
Length=285
Score = 127 bits (140), Expect = 3e-23
Identities = 151/205 (74%), Gaps = 6/205 (3%)
Strand=Plus/Plus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| |||||||| ||||| |||| | | ||| ||| |||||
Sbjct 87 TACAAGGTGCTGAAGCAGGTCCACCCGGACACCGGTATTTCGTCC------AAGGCCATG 140
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
|||||||| ||||||||||||||||| | || ||||||| | ||| || |||
Sbjct 141 GGCATCATGAATTCGTTTGTCAACGACATCTTTGAGCGCATCGCCGGCGAAGCATCCCGC 200
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| | |||||||||| ||| ||| | |||||||||||||| ||||||||
Sbjct 201 CTGGCGCATTACAACAAGCGCTCCACTATCACGTCCCGCGAGATCCAGACGGCCGTGCGT 260
Query 725094 CTGATCATGCGCGGCGAACTGGCCA 725118
||| | ||| ||| || |||||||
Sbjct 261 CTGCTGCTGCCCGGAGAGCTGGCCA 285
>seq1888768
Length=843
Score = 114 bits (126), Expect = 2e-19
Identities = 123/163 (75%), Gaps = 0/163 (0%)
Strand=Plus/Minus
Query 724980 ATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGCCTGGCG 725039
||| | ||||| || ||||||| |||| ||||||| | |||||||| ||||||||
Sbjct 704 ATGGATTCGTTCGTTCACGACATCCTCGATCGCATCGCCCAGGAGGCCGGCCGCCTGGCC 645
Query 725040 CGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGCCTGATC 725099
|||| || | |||| || ||| | | | ||||||||||| ||||||||||||||
Sbjct 644 CGCTACACCCGGCGCTCGACCATCACCTCCAGAGAGATCCAGACGGCCGTGCGCCTGATG 585
Query 725100 ATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| ||| || | | || ||||||||| |||||||||| ||
Sbjct 584 CTGCCCGGGGACATCGGCAAGCACGCCGTGTCCGAGGGCAACA 542
>seq2944646
Length=1110
Score = 113 bits (124), Expect = 6e-19
Identities = 162/229 (71%), Gaps = 6/229 (3%)
Strand=Plus/Minus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| |||||||| |||||| |||| | | || ||| |||||
Sbjct 582 TACAAGGTGCTGAAGCAGGTCCACCCCGACACCGGTATTTCGTCT------AAGGCCATG 529
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
|| ||||| ||||| |||||||| || | || || |||| | ||||| |||
Sbjct 528 GGAATTATGAATTCGTTCGTCAACGATATTTTTGAGCGTATCGCCGGTGAGGCTTCTCGG 469
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
|||||| | |||||||||| || ||| | | ||||||||||| |||||||||
Sbjct 468 TTGGCGCATTACAACAAGCGCTCGACTATCACTTCCAGGGAGATCCAGACGGCCGTGCGC 409
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | | | || || ||||||| ||||||||| || ||||| ||||
Sbjct 408 CTGCTGCTTCCTGGAGAGCTGGCCAAGCACGCCGTGTCTGAGGGGACCA 360
>seq1899669
Length=2366
Score = 109 bits (120), Expect = 8e-18
Identities = 131/178 (74%), Gaps = 0/178 (0%)
Strand=Plus/Plus
Query 724965 AAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAG 725024
||| ||||| ||||||||||||||||| || || || | || ||||||| |||
Sbjct 677 AAGGCCATGGGTATCATGAACTCGTTTGTTAATGATATCTTTGAGCGCATCGCGGGTGAG 736
Query 725025 GCCGGTCGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACC 725084
|| ||||||||||| | |||||||||| || ||| | | | |||||||||||
Sbjct 737 GCTTCTCGCCTGGCGCATTACAACAAGCGCTCGACTATCACCTCCAGGGAGATCCAGACT 796
Query 725085 GCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
|| || ||| || | ||| || || |||||| ||||||||| || ||||||||||
Sbjct 797 GCTGTTCGCTTGTTGTTGCCTGGAGAGTTGGCCAAGCACGCCGTGTCTGAGGGCACCA 854
>seq2060647
Length=217
Score = 105 bits (116), Expect = 9e-17
Identities = 90/111 (81%), Gaps = 0/111 (0%)
Strand=Plus/Minus
Query 725032 GCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGC 725091
||||||||| || |||||||||| || ||| | |||||| | ||||| |||||||
Sbjct 217 GCCTGGCGCACTACAACAAGCGCTCGACCATCACGTCCCGCGAGGTGCAGACGGCCGTGC 158
Query 725092 GCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||||| | ||| |||||| ||||||| ||||||||| |||||||||||||
Sbjct 157 GCCTGCTGCTGCCCGGCGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 107
>seq1712017
Length=2298
Score = 100 bits (110), Expect = 4e-15
Identities = 146/205 (71%), Gaps = 6/205 (3%)
Strand=Plus/Plus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
|||||||| || |||||||| || || |||| ||| || |||| |||||
Sbjct 2100 TACAAGGTACTGAAGCAGGTCCATCCTGACACCGG-----CATT-TCGTCCAAGGCCATG 2153
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
|||||||||||||| |||||||| || | || ||||| | ||||| ||||
Sbjct 2154 GGCATCATGAACTCGTTCGTCAACGATATCTTTGAGCGCATTGCGGGGGAGGCGTCTCGC 2213
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| | |||||||||| || ||| | | | ||||||||||| ||||||||
Sbjct 2214 CTGGCGCATTACAACAAGCGCTCGACCATCACCTCCAGGGAGATCCAGACGGCCGTGCGT 2273
Query 725094 CTGATCATGCGCGGCGAACTGGCCA 725118
||| | ||| ||| || |||||||
Sbjct 2274 CTGCTGCTGCCCGGAGAGCTGGCCA 2298
>seq1653393
Length=11938
Score = 91.5 bits (100), Expect = 2e-12
Identities = 161/232 (69%), Gaps = 6/232 (3%)
Strand=Plus/Minus
Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970
|||||||| ||||||||||| || || || || ||| |||| || |||| ||
Sbjct 9381 ATCTACAAAGTGCTCAAGCAAGTTCATCCAGATAC---TGG--CATC-TCTTCCAAGGCC 9328
Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030
||| |||||||| || || || | ||||| | || || |||| |||||
Sbjct 9327 ATGAGTATCATGAATTCCTTCGTTACTGACATTTTTGAACGTATCGCAGGAGAGGCGTCC 9268
Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090
||| |||| | | |||||| || || ||| | | | ||||||||||| ||||||
Sbjct 9267 CGCTTGGCCCATTACAACAAACGGTCGACCATCACCTCCAGGGAGATCCAGACAGCCGTG 9208
Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
|| ||| | ||| || || ||||||| |||||| || ||||| |||||||
Sbjct 9207 CGTCTGCTGCTGCCTGGGGAGCTGGCCAAGCACGCGGTATCCGAAGGCACCA 9156
Score = 89.7 bits (98), Expect = 7e-12
Identities = 93/122 (76%), Gaps = 0/122 (0%)
Strand=Plus/Plus
Query 725021 CGAGGCCGGTCGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCA 725080
|||||| | |||||||||| | |||||||||| || ||| | | | || |||||
Sbjct 2377 CGAGGCTTTTTGCCTGGCGCGTTACAACAAGCGCTCAACCATCACCTCCAGGGACATCCA 2436
Query 725081 GACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140
|| |||||||||||| | |||| || ||||||||| |||||| || || ||||||||
Sbjct 2437 GATGGCCGTGCGCCTGCTGCTGCGGGGGAAACTGGCCAAGCACGCTGTGTCTGAGGGCAC 2496
Query 725141 CA 725142
||
Sbjct 2497 CA 2498
>seq1615235
Length=3244
Score = 86.0 bits (94), Expect = 9e-11
Identities = 88/114 (77%), Gaps = 1/114 (1%)
Strand=Plus/Plus
Query 1455716 GAGCCGCTGCTGCGCGATAACCCGAACCGCTTTGTCCTGTTCCCCATCCGCTACCAGCGG 1455775
|| || |||||| | || ||||| ||||||||||| | || || ||| |||||
Sbjct 176 GAACCACTGCTGAGAGAAAACCCCCACCGCTTTGTCATCTTTCCTATCGAATACCATGAT 235
Query 1455776 ATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGT 1455829
|| ||| ||||||| | |||| ||||||| ||||||||||| |||||||||||
Sbjct 236 ATTTGGCAAATGTATAAGAAAG-CCGAGGCTTCCTTTTGGACGGCCGAGGAGGT 288
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6866145893611410
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