Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Daubentonia_20madagascariensis_20[genbank_20GCA_5F000241425.1_202012
-01-05] 3,231,305 sequences; 2,855,365,987 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq2031399 104 2e-17
seq1731777 84.2 2e-11
>seq2031399
Length=344
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||| | |||||||| | ||| | || |||||||||||||||||| || | |
Sbjct 248 CCACCACGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGAC 189
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
|| || || | || ||||| ||||| || ||||| |||| | ||||| || | ||||
Sbjct 188 AAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAAATCAGTCTTTGCTGATCAGGAGGA 129
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689
| | ||||| ||| |||||| ||| | | || | | || || | ||| |||
Sbjct 128 ATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCGACC 69
Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|| | ||||| || || || || | ||||| || || ||||||||
Sbjct 68 TCGAGAGTGATAGTCTTCCCTGTAAGGGTTTTTACGAAAATCTGCAT 22
>seq1731777
Length=2471
Score = 84.2 bits (92), Expect = 2e-11
Identities = 150/219 (68%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 35522 CTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCG 35581
|||||||| | ||| | || |||||||||||||||||| || | ||| || | ||
Sbjct 714 CTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACATCCG 773
Query 35582 TCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTG 35641
|| ||||| ||||| || ||||| |||| | ||||| || | | ||| | ||||
Sbjct 774 TCTTCCAGTTGCTTGCCAGCAAAAATCAGTCTTTGCTGATCAGGAAGAATTCCTTCCTCA 833
Query 35642 TCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATC 35701
| | |||||| || | | || | ||||| | ||| ||||| | |||||
Sbjct 834 TACTGGATCTTGGCTTTTACATTTTATATTGTGTCCGAGGGTTCAACCTCGAGAGTGATG 893
Query 35702 GTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTCTG 35740
|| || ||| | | ||||| ||||| ||||||||| ||
Sbjct 894 GTCTTCCCCATAAGGGTTTTTACAAAAATCTGCATTTTG 932
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433043732437770
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |