Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Daubentonia_20madagascariensis_20[genbank_20GCA_5F000241425.1_202012
-01-05] 3,231,305 sequences; 2,855,365,987 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq2031399 116 4e-21
seq1731777 107 2e-18
seq2677557 104 2e-17
seq1627958 95.1 1e-14
seq1537392 93.3 4e-14
seq1799193 86.0 6e-12
seq3019692 84.2 2e-11
>seq2031399
Length=344
Score = 116 bits (128), Expect = 4e-21
Identities = 161/223 (72%), Gaps = 2/223 (1%)
Strand=Plus/Minus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTG 134554
|||| |||||| || || || ||||| |||||||||||||||||||| | ||| || |
Sbjct 239 AGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAA-AGTACG 181
Query 134555 AGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTC 134614
|| || || || ||||| |||||||||| | |||||||| || || || |||||
Sbjct 180 TCCATCTTCCAGTTGCTTGCCAGCAAAAATCAGTCTTTGCTGATCAGGAGGAATTCCTTC 121
Query 134615 TTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGT 134674
|| || || || || || || || | ||| || || | ||| || ||||||||
Sbjct 120 CTTATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCGACCTCGAGAGT 61
Query 134675 AATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717
|| || || || || | ||||| |||||||| ||||| |||
Sbjct 60 GATAGTCTTCCCTGTAAGGGTTTTTACGAAAATCTGCATCTTG 18
>seq1731777
Length=2471
Score = 107 bits (118), Expect = 2e-18
Identities = 159/223 (71%), Gaps = 2/223 (1%)
Strand=Plus/Plus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTG 134554
|||| |||||| || || || ||||| |||||||||||||||||||| | ||| ||
Sbjct 711 AGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAA-AGTACA 769
Query 134555 AGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTC 134614
||| || || || ||||| |||||||||| | |||||||| || | || |||||
Sbjct 770 TCCGTCTTCCAGTTGCTTGCCAGCAAAAATCAGTCTTTGCTGATCAGGAAGAATTCCTTC 829
Query 134615 TTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGT 134674
| | || || || ||| || | | |||||| || | ||| || ||||||||
Sbjct 830 CTCATACTGGATCTTGGCTTTTACATTTTATATTGTGTCCGAGGGTTCAACCTCGAGAGT 889
Query 134675 AATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717
||||| || || | | ||||| || ||||| |||||||||
Sbjct 890 GATGGTCTTCCCCATAAGGGTTTTTACAAAAATCTGCATTTTG 932
>seq2677557
Length=202
Score = 104 bits (114), Expect = 2e-17
Identities = 134/184 (73%), Gaps = 1/184 (1%)
Strand=Plus/Plus
Query 134530 GAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAAC 134589
|||||||||||||| || ||||| || || ||| ||||||||||||| |||| ||
Sbjct 6 GAATGTTGTAGTCGGAAAGAGTGTGGCCATCCTCCAGCCGTTTGCCTGCAAATATCAGAC 65
Query 134590 GCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATG 134649
|||||| ||||| || ||||| || || ||||| ||||| |||||| || | |
Sbjct 66 ACTGCTGGTCGGG-GGGATGCCCTCCTTGTCTTGGATTTTGGCTTTGACGTTCTCGATGG 124
Query 134650 TGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTT 134709
|||| | ||||| ||||| || ||||| || || || | || || ||||| || |
Sbjct 125 TGTCACTGGGCTCCACCTCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCT 184
Query 134710 GCAT 134713
||||
Sbjct 185 GCAT 188
>seq1627958
Length=3316
Score = 95.1 bits (104), Expect = 1e-14
Identities = 112/152 (74%), Gaps = 0/152 (0%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
||||| |||| | ||| || | ||| || ||||| || || | |||||||||||
Sbjct 320 CCTCCCCTGAAGCACAAGACCAAGTGCAGGGTGGACTCTTTCTAGATGTTGTAGTCAGAC 261
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
|||||| | || || |||||||| || ||||| ||||| | ||||||||| || ||
Sbjct 260 ACGGTGCGTCCATCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGATCAGGGGGG 201
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGAC 134638
|||||||| || ||||| || ||| |||||
Sbjct 200 ATGCCTTCCTTGTCTTGGATCTTTGCCTTGAC 169
>seq1537392
Length=19804
Score = 93.3 bits (102), Expect = 4e-14
Identities = 143/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTG 134569
||| || ||||| || || || ||||||||||| | |||||| || | | |||
Sbjct 12063 GTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGTGTCCATCTTTCACCTG 12004
Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629
||| || ||||| ||||||| ||||||||| || | |||||||| || ||||| || ||
Sbjct 12003 TTTCCCAGCAAAGATCAAACTCTGCTGATCAGGAAGGATGCCTTCCTTGTCTTGGATCTT 11944
Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689
|| |||| || | ||||| | || || ||||| || ||||| || |||||
Sbjct 11943 TTCCATGACATTCTCAATGGTGTCATTGGGCTCTACCTCGAGGGTGATGGTCTTGCCGGT 11884
Query 134690 TAAAGTTTTAACGAAAATTTGCAT 134713
| || || || || || |||||
Sbjct 11883 CAGGGTCTTCACAAAGATCTGCAT 11860
>seq1799193
Length=4297
Score = 86.0 bits (94), Expect = 6e-12
Identities = 152/219 (69%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTG 134554
|||| |||||| || || || ||||| | |||||||||||||||||| | ||| || ||
Sbjct 2093 AGTCTCAACACAAGATGAAGAGTGGACTTCTTTTGAATGTTGTAGTCAGACAA-AGTATG 2035
Query 134555 AGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTC 134614
|| || || || |||| |||||||| | | || ||||| || || || |||||
Sbjct 2034 TCCATCTTCTAGTTGCTTGCAAGCAAAAATTAGTCTTTGTTGATCAGGAGGAATTCCTTC 1975
Query 134615 TTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGT 134674
|| || ||||| || || || || ||| || || | ||| || || |||||
Sbjct 1974 CTTATCCTGAATCTTGGCCTTTACATTTTCTCTTGTATCCGAGGGTTCAACCTCAAGAGT 1915
Query 134675 AATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
||||| || || || | |||| | |||||| | |||
Sbjct 1914 GATGGTCTTCCCTGTAAGGATTTTTATGAAAATCTACAT 1876
>seq3019692
Length=452
Score = 84.2 bits (92), Expect = 2e-11
Identities = 153/223 (69%), Gaps = 1/223 (0%)
Strand=Plus/Plus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555
|||| | |||| ||||| || |||| |||||||||||||||||||| | ||
Sbjct 118 AGTCTCGACACAAGGTGAAGACTGGACTCCTTTTGAATGTTGTAGTCATACAAAGTACAT 177
Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615
|| || || || ||||| |||||||||| | |||||||| || || || |||||
Sbjct 178 CCATCTTCCAGTTGCTTGCCAGCAAAAATCACTCTTTGCTGATCAGGAGGAATTCCTTCC 237
Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675
|| || || || || || || | | | | || || | ||| || | ||||||
Sbjct 238 TTATCCTGGATCTTGGCCTTTACATTTTGTATTATATCTGAGGGTTCAACCTTGAGAGTG 297
Query 134676 ATGG-TTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717
|||| ||| || || | | |||| || ||||| ||||| |||
Sbjct 298 ATGGCCTTTCCCTGTAAGAATTTTTACAAAAATCTGCATCTTG 340
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 484984695288600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |