Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daubentonia_20madagascariensis_20[genbank_20GCA_5F000241425.1_202012 -01-05] 3,231,305 sequences; 2,855,365,987 total letters Query= NC_027016.1 Length=226084 Score E Sequences producing significant alignments: (Bits) Value seq1995885 89.7 7e-13 >seq1995885 Length=2464 Score = 89.7 bits (98), Expect = 7e-13 Identities = 189/282 (67%), Gaps = 0/282 (0%) Strand=Plus/Plus Query 214601 AGGGAAGGAGATAGCTGTCGAGCTGGAGGCCTTCTACGGTGATATCGAAGCCGTCGAACT 214660 || |||||| || |||| ||| |||| ||| |||| |||||||| || || | || || Sbjct 1154 AGAGAAGGAAATGGCTGCAGAGTTGGAAGCCCTCTATGGTGATATTGATGCTATGGAGCT 1213 Query 214661 CTACGCTGATTTCCTCGCTGAAAAACCGTGTCCCGATGCCATCCTCGGTGACGGCGTCCT 214720 || ||| | || | ||||| || |||| ||||||||| | ||||| | | | Sbjct 1214 GTATCCTGCCCTTCTGGTAGAAAAGCCTCGTCCAGATGCCATCTTTGGTGAGACCATGGT 1273 Query 214721 CGAGTCGGGGGCTCCGTTCTCCCTGAGGGGACTCGCGGCGAACGTCATCTGCTCCCCGGG 214780 || || || || |||||| ||| ||||| || || ||||| || || | Sbjct 1274 AGAAGTTGGAGCACCATTCTCCTTGAAAGGACTTATGGGTAATACTATCTGTTCTCCTGA 1333 Query 214781 CTACTGGAAACGCAACACACTCGGTAGCTCCGCGAGTTTCAACATCGTGAGGAGCGCGAC 214840 ||||||||| | | ||| ||||| | | |||| || ||| | | | || | Sbjct 1334 CTACTGGAAGCCAAGCACTTTCGGTGGAGAAGTAGGTTTTAAAATCATCAACACTGCCTC 1393 Query 214841 CCTTCAGTCTCTCATCTGTAGCAACGTCAAGGGATGTCCGTT 214882 |||||||||||||||| || || || ||||| ||||| || Sbjct 1394 AATTCAGTCTCTCATCTGCAGTAATGTGAAGGGCTGTCCCTT 1435 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694124115703200